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    LOC121117405 anoctamin-5-like [ Lepeophtheirus salmonis (salmon louse) ]

    Gene ID: 121117405, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC121117405
    Gene description
    anoctamin-5-like
    See related
    EnsemblRapid:LOC121117405
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Lepeophtheirus salmonis
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Hexanauplia; Copepoda; Siphonostomatoida; Caligidae; Lepeophtheirus
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    Genomic context

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    See LOC121117405 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    100 current UVic_Lsal_1.1 (GCF_016086655.2) 5 NC_052135.1 (53347801..53386953)

    Chromosome 5 - NC_052135.1Genomic Context describing neighboring genes Neighboring gene ER degradation-enhancing alpha-mannosidase-like protein 2 Neighboring gene uncharacterized LOC121117440 Neighboring gene uncharacterized LOC121117407 Neighboring gene Ubiquitin carboxyl-terminal hydrolase Neighboring gene glutaredoxin domain-containing cysteine-rich protein CG31559-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_052135.1 Chromosome 5 Reference UVic_Lsal_1.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chloride channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chloride transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    anoctamin-4-like; anoctamin-5-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Lepeophtheirus salmonis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UVic_Lsal_1.1 Primary Assembly

    Genomic

    1. NC_052135.1 Reference UVic_Lsal_1.1 Primary Assembly

      Range
      53347801..53386953
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040711823.1 → XP_040567757.1  anoctamin-4-like isoform X1

      Related
      XP_040567757.1, XM_040711823.1

    2. XM_040711825.1 → XP_040567759.1  anoctamin-5-like isoform X2

      Related
      XP_040567759.1, XM_040711825.1
    Nucleotide Protein
    Heading Accession and Version

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