U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    GRIK4 glutamate ionotropic receptor kainate type subunit 4 [ Pteropus giganteus (Indian flying fox) ]

    Gene ID: 120584055, updated on 30-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    GRIK4
    Gene description
    glutamate ionotropic receptor kainate type subunit 4
    See related
    EnsemblRapid:ENSPGIG00000018336
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pteropus giganteus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See GRIK4 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    100 current Ma_sr-lr_union100 (GCF_902729225.1) Unplaced Scaffold NW_024350327.1 (99159..550083)

    NW_024350327.1Genomic Context describing neighboring genes Neighboring gene 5S ribosomal RNA Neighboring gene 5S ribosomal RNA Neighboring gene 5S ribosomal RNA Neighboring gene 5S ribosomal RNA

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_024350327 Unplaced Scaffold Reference Ma_sr-lr_union100

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables kainate selective glutamate receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in modulation of chemical synaptic transmission IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in monoatomic ion transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in synaptic transmission, glutamatergic IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of kainate selective glutamate receptor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in postsynaptic membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in presynaptic membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    glutamate receptor ionotropic, kainate 4

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Pteropus giganteus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Ma_sr-lr_union100

    Genomic

    1. NW_024350327.1 Reference Ma_sr-lr_union100

      Range
      99159..550083
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039839626.1 → XP_039695560.1  glutamate receptor ionotropic, kainate 4 isoform X1

      Conserved Domains (2) summary
      cd13724
      Location:415 → 785
      PBP2_iGluR_kainate_KA1; The ligand-binding domain of the kainate subtype KA1 of ionotropic glutamate receptors, a member of the type 2 periplasmic-binding fold protein superfamily
      cl10011
      Location:24 → 402
      Periplasmic_Binding_Protein_type1; Type 1 periplasmic binding fold superfamily

    2. XM_039839628.1 → XP_039695562.1  glutamate receptor ionotropic, kainate 4 isoform X1

      Conserved Domains (2) summary
      cd13724
      Location:415 → 785
      PBP2_iGluR_kainate_KA1; The ligand-binding domain of the kainate subtype KA1 of ionotropic glutamate receptors, a member of the type 2 periplasmic-binding fold protein superfamily
      cl10011
      Location:24 → 402
      Periplasmic_Binding_Protein_type1; Type 1 periplasmic binding fold superfamily

    3. XM_039839627.1 → XP_039695561.1  glutamate receptor ionotropic, kainate 4 isoform X1

      Conserved Domains (2) summary
      cd13724
      Location:415 → 785
      PBP2_iGluR_kainate_KA1; The ligand-binding domain of the kainate subtype KA1 of ionotropic glutamate receptors, a member of the type 2 periplasmic-binding fold protein superfamily
      cl10011
      Location:24 → 402
      Periplasmic_Binding_Protein_type1; Type 1 periplasmic binding fold superfamily

    4. XM_039839629.1 → XP_039695563.1  glutamate receptor ionotropic, kainate 4 isoform X1

      Related
      ENSPGIP00000015709.1, ENSPGIT00000023954.1
      Conserved Domains (2) summary
      cd13724
      Location:415 → 785
      PBP2_iGluR_kainate_KA1; The ligand-binding domain of the kainate subtype KA1 of ionotropic glutamate receptors, a member of the type 2 periplasmic-binding fold protein superfamily
      cl10011
      Location:24 → 402
      Periplasmic_Binding_Protein_type1; Type 1 periplasmic binding fold superfamily

    5. XM_039839631.1 → XP_039695565.1  glutamate receptor ionotropic, kainate 4 isoform X2

      Conserved Domains (2) summary
      cd13724
      Location:381 → 751
      PBP2_iGluR_kainate_KA1; The ligand-binding domain of the kainate subtype KA1 of ionotropic glutamate receptors, a member of the type 2 periplasmic-binding fold protein superfamily
      cl10011
      Location:1 → 368
      Periplasmic_Binding_Protein_type1; Type 1 periplasmic binding fold superfamily
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.