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    LOC120431895 elongation of very long chain fatty acids protein 4-like [ Culex pipiens pallens (northern house mosquito) ]

    Gene ID: 120431895, updated on 9-Apr-2024

    Summary

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    Gene symbol
    LOC120431895
    Gene description
    elongation of very long chain fatty acids protein 4-like
    See related
    EnsemblRapid:LOC120431895
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Culex pipiens pallens (sub-species: pallens)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Culicinae; Culicini; Culex; Culex
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    Genomic context

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    See LOC120431895 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2022_12 current TS_CPP_V2 (GCF_016801865.2) 2 NC_068938.1 (131655628..131671586, complement)
    100 previous assembly TS_Cpip_V1 (GCF_016801865.1) Unplaced Scaffold NW_024110378.1 (12460..28504)

    Chromosome 2 - NC_068938.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein Xfin-like Neighboring gene uncharacterized LOC120415330 Neighboring gene phospholipase D2 Neighboring gene over compensating males Neighboring gene uncharacterized LOC120424699 Neighboring gene 40S ribosomal protein S2-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables fatty acid elongase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in fatty acid elongation, monounsaturated fatty acid IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in fatty acid elongation, polyunsaturated fatty acid IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in fatty acid elongation, saturated fatty acid IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sphingolipid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in very long-chain fatty acid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    elongation of very long chain fatty acids protein 4-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_016801865.2-RS_2022_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference TS_CPP_V2 Primary Assembly

    Genomic

    1. NC_068938.1 Reference TS_CPP_V2 Primary Assembly

      Range
      131655628..131671586 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039597028.2 → XP_039452962.1  elongation of very long chain fatty acids protein 4-like

      Related
      XP_039452962.1, XM_039597028.2

    2. XM_052708155.1 → XP_052564115.1  elongation of very long chain fatty acids protein 4-like

      Related
      XP_052564115.1, XM_052708155.1
    Nucleotide Protein
    Heading Accession and Version

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