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    LOC120430294 irregular chiasm C-roughest protein-like [ Culex pipiens pallens (northern house mosquito) ]

    Gene ID: 120430294, updated on 9-Apr-2024

    Summary

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    Gene symbol
    LOC120430294
    Gene description
    irregular chiasm C-roughest protein-like
    See related
    EnsemblRapid:LOC120430294
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Culex pipiens pallens (sub-species: pallens)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Culicinae; Culicini; Culex; Culex
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    Genomic context

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    See LOC120430294 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2022_12 current TS_CPP_V2 (GCF_016801865.2) 1 NC_068937.1 (58491345..58518115, complement)
    100 previous assembly TS_Cpip_V1 (GCF_016801865.1) Unplaced Scaffold NW_024109858.1 (118285..130608, complement)

    Chromosome 1 - NC_068937.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120423053 Neighboring gene homeotic protein ocelliless Neighboring gene liver carboxylesterase-like Neighboring gene uncharacterized LOC120420401 Neighboring gene uncharacterized LOC128092393

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cell adhesion molecule binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell-cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cell-cell junction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    irregular chiasm C-roughest protein-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_016801865.2-RS_2022_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference TS_CPP_V2 Primary Assembly

    Genomic

    1. NC_068937.1 Reference TS_CPP_V2 Primary Assembly

      Range
      58491345..58518115 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_052706433.1 → XP_052562393.1  irregular chiasm C-roughest protein-like isoform X3

      Related
      XP_052562393.1, XM_052706433.1

    2. XM_052706428.1 → XP_052562388.1  irregular chiasm C-roughest protein-like isoform X1

      Related
      XP_052562388.1, XM_052706428.1

    3. XM_052706425.1 → XP_052562385.1  irregular chiasm C-roughest protein-like isoform X1

      Related
      XP_052562385.1, XM_052706425.1

    4. XM_052706424.1 → XP_052562384.1  irregular chiasm C-roughest protein-like isoform X1

      Related
      XP_052562384.1, XM_052706424.1

    5. XM_052706429.1 → XP_052562389.1  irregular chiasm C-roughest protein-like isoform X2

      Related
      XP_052562389.1, XM_052706429.1
    Nucleotide Protein
    Heading Accession and Version

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