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    LOC120062557 C-terminal-binding protein 2 [ Salvelinus namaycush (lake trout) ]

    Gene ID: 120062557, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC120062557
    Gene description
    C-terminal-binding protein 2
    See related
    EnsemblRapid:ENSSNMG00000004879
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Salvelinus namaycush
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salvelinus
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    Genomic context

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    See LOC120062557 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    100 current SaNama_1.0 (GCF_016432855.1) 17 NC_052323.1 (33636978..33652643, complement)

    Chromosome 17 - NC_052323.1Genomic Context describing neighboring genes Neighboring gene lysine-specific demethylase 3B-like Neighboring gene spondin-2-like Neighboring gene protein FAM53C-like Neighboring gene uncharacterized LOC120062093

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_052323.1 Chromosome 17 Reference SaNama_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables NAD binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription corepressor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    C-terminal-binding protein 1; C-terminal-binding protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Salvelinus namaycush Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference SaNama_1.0 Primary Assembly

    Genomic

    1. NC_052323.1 Reference SaNama_1.0 Primary Assembly

      Range
      33636978..33652643 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039012616.1 → XP_038868544.1  C-terminal-binding protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8U1H1D2
      Related
      ENSSNMP00000007004.1, ENSSNMT00000007646.1
      Conserved Domains (1) summary
      cd05299
      Location:34 → 352
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    2. XM_039012617.1 → XP_038868545.1  C-terminal-binding protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A8U1H421
      Related
      ENSSNMP00000006992.1, ENSSNMT00000007634.1
      Conserved Domains (1) summary
      cd05299
      Location:17 → 335
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    3. XM_039012618.1 → XP_038868546.1  C-terminal-binding protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A8U1H3S1
      Related
      ENSSNMP00000006989.1, ENSSNMT00000007630.1
      Conserved Domains (1) summary
      cd05299
      Location:5 → 323
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    4. XM_039012619.1 → XP_038868547.1  C-terminal-binding protein 2 isoform X4

      UniProtKB/TrEMBL
      A0A8U1H4H2
      Conserved Domains (1) summary
      cd05299
      Location:34 → 352
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor
    Nucleotide Protein
    Heading Accession and Version

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