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    LOC120056847 lymphocyte cytosolic protein 2-like [ Salvelinus namaycush (lake trout) ]

    Gene ID: 120056847, updated on 11-Apr-2024

    Summary

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    Gene symbol
    LOC120056847
    Gene description
    lymphocyte cytosolic protein 2-like
    See related
    EnsemblRapid:ENSSNMG00000034890
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Salvelinus namaycush
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salvelinus
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    Genomic context

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    See LOC120056847 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    100 current SaNama_1.0 (GCF_016432855.1) 12 NC_052318.1 (5969376..5982826)

    Chromosome 12 - NC_052318.1Genomic Context describing neighboring genes Neighboring gene putative ammonium transporter 1 Neighboring gene zinc finger, matrin-type 2 Neighboring gene forkhead box protein I1-ema-like Neighboring gene NHP2 ribonucleoprotein homolog (yeast)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_052318.1 Chromosome 12 Reference SaNama_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in cell surface receptor protein tyrosine kinase signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    lymphocyte cytosolic protein 2-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Salvelinus namaycush Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference SaNama_1.0 Primary Assembly

    Genomic

    1. NC_052318.1 Reference SaNama_1.0 Primary Assembly

      Range
      5969376..5982826
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039005086.1 → XP_038861014.1  lymphocyte cytosolic protein 2-like

      UniProtKB/TrEMBL
      A0A8U1C3D6
      Related
      ENSSNMP00000050144.1, ENSSNMT00000055086.1
      Conserved Domains (3) summary
      cd09522
      Location:10 → 78
      SAM_SLP76; SAM domain of SLP76 subfamily
      PHA03247
      Location:149 → 419
      PHA03247; large tegument protein UL36; Provisional
      cl15255
      Location:413 → 533
      SH2; Src homology 2 (SH2) domain
    Nucleotide Protein
    Heading Accession and Version

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