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    zbed4 zinc finger, BED-type containing 4 [ Salvelinus namaycush (lake trout) ]

    Gene ID: 120031913, updated on 21-Mar-2024

    Summary

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    Gene symbol
    zbed4
    Gene description
    zinc finger, BED-type containing 4
    See related
    EnsemblRapid:ENSSNMG00000028141
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Salvelinus namaycush
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salvelinus
    Orthologs
    human zebrafish all
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    Genomic context

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    See zbed4 in Genome Data Viewer
    Location:
    chromosome: 38
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    100 current SaNama_1.0 (GCF_016432855.1) 38 NC_052344.1 (1093669..1100079, complement)

    Chromosome 38 - NC_052344.1Genomic Context describing neighboring genes Neighboring gene cysteine-rich with EGF-like domain protein 2 Neighboring gene ALG12 alpha-1,6-mannosyltransferase Neighboring gene bromodomain containing 1a Neighboring gene chemokine-like protein TAFA-5

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_052344.1 Chromosome 38 Reference SaNama_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger BED domain-containing protein 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Salvelinus namaycush Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference SaNama_1.0 Primary Assembly

    Genomic

    1. NC_052344.1 Reference SaNama_1.0 Primary Assembly

      Range
      1093669..1100079 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038977758.1 → XP_038833686.1  zinc finger BED domain-containing protein 4

      UniProtKB/TrEMBL
      A0A8U0TZN8
      Related
      ENSSNMP00000039549.1, ENSSNMT00000044111.1
      Conserved Domains (2) summary
      pfam02892
      Location:215 → 263
      zf-BED; BED zinc finger
      pfam05699
      Location:1186 → 1263
      Dimer_Tnp_hAT; hAT family C-terminal dimerization region
    Nucleotide Protein
    Heading Accession and Version

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