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    pgr progesterone receptor [ Nematolebias whitei (Rio pearlfish) ]

    Gene ID: 119411368, updated on 21-Mar-2024

    Summary

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    Gene symbol
    pgr
    Gene description
    progesterone receptor
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Nematolebias whitei
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Nematolebias
    Orthologs
    zebrafish all
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    Genomic context

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    See pgr in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    100.20210725 current NemWhi1 (GCF_014905685.2) 6 NC_056503.1 (42665918..42680204)
    100 previous assembly NemWhi1 (GCF_014905685.1) Unplaced Scaffold NW_023618551.1 (42665918..42680204)

    Chromosome 6 - NC_056503.1Genomic Context describing neighboring genes Neighboring gene centrosomal protein 126 Neighboring gene transient receptor potential cation channel, subfamily C, member 6b Neighboring gene rho GTPase-activating protein 42 Neighboring gene contactin 5

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    progesterone receptor

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Nematolebias whitei Updated Annotation Release 100.20210725

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NemWhi1

    Genomic

    1. NC_056503.1 Reference NemWhi1

      Range
      42665918..42680204
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_037678310.1 → XP_037534238.1  progesterone receptor isoform X1

      Conserved Domains (2) summary
      cd07172
      Location:285 → 362
      NR_DBD_GR_PR; DNA-binding domain of glucocorticoid receptor (GR) is composed of two C4-type zinc fingers
      cl11397
      Location:408 → 655
      NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators

    2. XM_037678311.1 → XP_037534239.1  progesterone receptor isoform X2

      Conserved Domains (2) summary
      cd07172
      Location:239 → 316
      NR_DBD_GR_PR; DNA-binding domain of glucocorticoid receptor (GR) is composed of two C4-type zinc fingers
      cl11397
      Location:362 → 609
      NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators

    3. XM_037678312.1 → XP_037534240.1  progesterone receptor isoform X3

      Conserved Domains (2) summary
      cd07172
      Location:175 → 252
      NR_DBD_GR_PR; DNA-binding domain of glucocorticoid receptor (GR) is composed of two C4-type zinc fingers
      cl11397
      Location:298 → 545
      NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators
    Nucleotide Protein
    Heading Accession and Version

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