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    LOC119388225 cullin-4A-like [ Rhipicephalus sanguineus (brown dog tick) ]

    Gene ID: 119388225, updated on 1-Jul-2024

    Summary

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    Gene symbol
    LOC119388225
    Gene description
    cullin-4A-like
    See related
    VectorBase:RSAN_056061; EnsemblRapid:LOC119388225
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rhipicephalus sanguineus
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Rhipicephalinae; Rhipicephalus; Rhipicephalus
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC119388225 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    101 current BIME_Rsan_1.4 (GCF_013339695.2) 3 NC_051178.1 (210839634..210874263)
    100 previous assembly ASM1333969v1 (GCF_013339695.1) 3 NC_051178.1 (210839595..210924551)

    Chromosome 3 - NC_051178.1Genomic Context describing neighboring genes Neighboring gene rad2 superfamily protein mus201 Neighboring gene mediator of RNA polymerase II transcription subunit 11 Neighboring gene integrator complex subunit 6 Neighboring gene transmembrane protein 256 homolog Neighboring gene leucine carboxyl methyltransferase 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin protein ligase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA damage response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Cul4-RING E3 ubiquitin ligase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: cullin-4A-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Rhipicephalus sanguineus Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference BIME_Rsan_1.4

    Genomic

    1. NC_051178.1 Reference BIME_Rsan_1.4

      Range
      210839634..210874263
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_049413870.1 → XP_049269827.1  LOW QUALITY PROTEIN: cullin-4A-like

      Related
      XP_049269827.1, XM_049413870.1
    Nucleotide Protein
    Heading Accession and Version

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