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    sfrp1a secreted frizzled-related protein 1a [ Pungitius pungitius (ninespine stickleback) ]

    Gene ID: 119225372, updated on 21-Mar-2024

    Summary

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    Gene symbol
    sfrp1a
    Gene description
    secreted frizzled-related protein 1a
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pungitius pungitius
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Gasterosteales; Gasterosteidae; Pungitius
    Orthologs
    zebrafish all
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    Genomic context

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    See sfrp1a in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_01 current fPunPun2.1 (GCF_949316345.1) 5 NC_084904.1 (4409984..4420141, complement)
    100 previous assembly NSP_V7 (GCF_902500615.1) Unplaced Scaffold NW_023616467.1 (4415793..4426144, complement)

    Chromosome 5 - NC_084904.1Genomic Context describing neighboring genes Neighboring gene transcriptional and immune response regulator a Neighboring gene zinc finger, matrin-type 4a Neighboring gene golgin subfamily A member 7-like Neighboring gene lysyl oxidase-like 2b

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables Wnt-protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in canonical Wnt signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in non-canonical Wnt signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    secreted frizzled-related protein 1a

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_949316345.1-RS_2024_01

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fPunPun2.1

    Genomic

    1. NC_084904.1 Reference fPunPun2.1

      Range
      4409984..4420141 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_037483181.2 → XP_037339078.1  secreted frizzled-related protein 1a

      Conserved Domains (2) summary
      cd03580
      Location:179 → 303
      NTR_Sfrp1_like; NTR domain, Secreted frizzled-related protein (Sfrp) 1-like subfamily; composed of proteins similar to human Sfrp1, Sfrp2 and Sfrp5. Sfrps are soluble proteins containing an NTR domain C-terminal to a cysteine-rich Frizzled domain. They show diverse ...
      cl02447
      Location:47 → 170
      CRD_FZ; CRD_domain cysteine-rich domain, also known as Fz (frizzled) domain
    Nucleotide Protein
    Heading Accession and Version

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