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    pcnB polynucleotide adenylyltransferase PcnB [ Vibrio parahaemolyticus RIMD 2210633 ]

    Gene ID: 1190019, updated on 31-Jan-2024

    Summary

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    Gene symbol
    pcnB
    Gene description
    polynucleotide adenylyltransferase PcnB
    Locus tag
    VP_RS12150
    Gene type
    protein coding
    Organism
    Vibrio parahaemolyticus RIMD 2210633 (strain: RIMD 2210633, substrain: RIMD 2210633)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio
    Old locus tag
    VP2504
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    Genomic context

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    Location:
    chromosome: 1
    Sequence:
    Chromosome: 1; NC_004603.1 (2643032..2644399)

    Chromosome 1 - NC_004603.1Genomic Context describing neighboring genes Neighboring gene RNA polymerase-binding protein DksA Neighboring gene tRNA glutamyl-Q(34) synthetase GluQRS Neighboring gene 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase Neighboring gene 3-methyl-2-oxobutanoate hydroxymethyltransferase Neighboring gene pantoate--beta-alanine ligase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_004603.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Escherichia coli pcnB gene promotes adenylylation of antisense RNAI of ColE1-type plasmids in vivo and degradation of RNAI decay intermediates. Xu F, et al. Proc Natl Acad Sci U S A, 1993 Jul 15. PMID 7688127, Free PMC Article
    2. PcnB is required for the rapid degradation of RNAI, the antisense RNA that controls the copy number of ColE1-related plasmids. He L, et al. Mol Microbiol, 1993 Sep. PMID 7523833
    3. Polyadenylylation helps regulate mRNA decay in Escherichia coli. O'Hara EB, et al. Proc Natl Acad Sci U S A, 1995 Mar 14. PMID 7534403, Free PMC Article
    4. A filamentous phage associated with recent pandemic Vibrio parahaemolyticus O3:K6 strains. Nasu H, et al. J Clin Microbiol, 2000 Jun. PMID 10834969, Free PMC Article
    5. Genome sequence of Vibrio parahaemolyticus: a pathogenic mechanism distinct from that of V cholerae. Makino K, et al. Lancet, 2003 Mar 1. PMID 12620739

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    polynucleotide adenylyltransferase PcnB
    WP_015297242.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004603.1 Reference assembly

      Range
      2643032..2644399
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_015297242.1 MULTISPECIES: polynucleotide adenylyltransferase PcnB [Vibrio]

      See identical proteins and their annotated locations for WP_015297242.1

      UniProtKB/TrEMBL
      A0A0E2XSC9
      Conserved Domains (1) summary
      PRK11623
      Location:13 → 432
      pcnB; poly(A) polymerase I; Provisional

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