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    LOC118421992 G-protein coupled receptor 84-like [ Branchiostoma floridae (Florida lancelet) ]

    Gene ID: 118421992, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC118421992
    Gene description
    G-protein coupled receptor 84-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Branchiostoma floridae
    Lineage
    Eukaryota; Metazoa; Chordata; Cephalochordata; Leptocardii; Amphioxiformes; Branchiostomatidae; Branchiostoma
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    Genomic context

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    See LOC118421992 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    100 current Bfl_VNyyK (GCF_000003815.2) 1 NC_049979.1 (1295814..1297685, complement)

    Chromosome 1 - NC_049979.1Genomic Context describing neighboring genes Neighboring gene probable 4-coumarate--CoA ligase 1 Neighboring gene cytochrome P450 2J6-like Neighboring gene programmed cell death protein 2-like Neighboring gene CMP-N-acetylneuraminate-poly-alpha-2,8-sialyltransferase-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_049979.1 Chromosome 1 Reference Bfl_VNyyK Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    G-protein coupled receptor 84-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Branchiostoma floridae Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Bfl_VNyyK Primary Assembly

    Genomic

    1. NC_049979.1 Reference Bfl_VNyyK Primary Assembly

      Range
      1295814..1297685 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_035829498.1 → XP_035685391.1  G-protein coupled receptor 84-like

      UniProtKB/TrEMBL
      C3YGU3
      Conserved Domains (3) summary
      cd00637
      Location:9 → 215
      7tm_classA_rhodopsin-like; rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor superfamily
      cd14964
      Location:346 → 372
      7tm_GPCRs; TM helix 6 [structural motif]
      cl28897
      Location:328 → 411
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
    Nucleotide Protein Strain
    Heading Accession and Version

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