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    LOC118319014 alpha-2 adrenergic receptor-like [ Scophthalmus maximus (turbot) ]

    Gene ID: 118319014, updated on 23-Oct-2023

    Summary

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    Gene symbol
    LOC118319014
    Gene description
    alpha-2 adrenergic receptor-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Scophthalmus maximus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Scophthalmidae; Scophthalmus
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    Genomic context

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    See LOC118319014 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    101 current ASM2237912v1 (GCF_022379125.1) 12 NC_061526.1 (4089641..4095046)
    100 previous assembly ASM1334776v1 (GCF_013347765.1) 2 NC_049689.1 (6320993..6326391, complement)

    Chromosome 12 - NC_061526.1Genomic Context describing neighboring genes Neighboring gene hepatocyte growth factor activator Neighboring gene protein Dok-7-like Neighboring gene uncharacterized LOC118319052 Neighboring gene uncharacterized LOC118319041 Neighboring gene homeobox protein HMX1-like Neighboring gene homeobox protein HMX2-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables alpha2-adrenergic receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in adenylate cyclase-activating adrenergic receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in platelet activation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of smooth muscle contraction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of vasoconstriction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: alpha-2 adrenergic receptor-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Scophthalmus maximus Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM2237912v1 Primary Assembly

    Genomic

    1. NC_061526.1 Reference ASM2237912v1 Primary Assembly

      Range
      4089641..4095046
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_035649058.2 → XP_035504951.2  LOW QUALITY PROTEIN: alpha-2 adrenergic receptor-like

    Nucleotide Protein Strain
    Heading Accession and Version

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    Molecular Biology Databases