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    PSPTO_RS05405 phospholipase D-like domain-containing protein [ Pseudomonas syringae pv. tomato str. DC3000 ]

    Gene ID: 1182658, updated on 10-Oct-2024

    Summary

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    Gene symbol
    PSPTO_RS05405
    Gene description
    phospholipase D-like domain-containing protein
    Locus tag
    PSPTO_RS05405
    Gene type
    protein coding
    Organism
    Pseudomonas syringae pv. tomato str. DC3000 (strain: DC3000, pathovar: tomato, type-material: reference strain of Pseudomonas syringae group genomosp. 3)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
    Old locus tag
    PSPTO1024; PSPTO_1024
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    Genomic context

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    Sequence:
    NC_004578.1 (1117166..1118434)

    NC_004578.1Genomic Context describing neighboring genes Neighboring gene type III effector Neighboring gene MotA/TolQ/ExbB proton channel family protein Neighboring gene murein transglycosylase A Neighboring gene cellulose biosynthesis protein BcsQ Neighboring gene UDP-forming cellulose synthase catalytic subunit

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_004578.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000. Buell CR, et al. Proc Natl Acad Sci U S A, 2003 Sep 2. PMID 12928499, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    phospholipase D-like domain-containing protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004578.1 Reference assembly

      Range
      1117166..1118434
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_011103387.1 phospholipase D-like domain-containing protein [Pseudomonas syringae group genomosp. 3]

      See identical proteins and their annotated locations for WP_011103387.1

      UniProtKB/TrEMBL
      A0A3M6CBU5, A0AAP1A4P7, Q888K0
      Conserved Domains (3) summary
      cd09106
      Location:39 → 183
      PLDc_vPLD3_4_5_like_1; Putative catalytic domain, repeat 1, of vertebrate phospholipases, PLD3, PLD4 and PLD5, viral envelope proteins K4 and p37, and similar proteins
      cd09107
      Location:228 → 395
      PLDc_vPLD3_4_5_like_2; Putative catalytic domain, repeat 2, of vertebrate phospholipases, PLD3, PLD4 and PLD5, viral envelope proteins K4 and p37, and similar proteins
      pfam13091
      Location:62 → 197
      PLDc_2; PLD-like domain
    Nucleotide Protein
    Heading Accession and Version

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