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    AGA aspartylglucosaminidase [ Zootoca vivipara (common lizard) ]

    Gene ID: 118083557, updated on 20-Mar-2024

    Summary

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    Gene symbol
    AGA
    Gene description
    aspartylglucosaminidase
    See related
    EnsemblRapid:ENSZVIG00000004277
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Zootoca vivipara
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Zootoca
    Orthologs
    human mouse all
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    Genomic context

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    See AGA in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2023_10 current rZooViv1.1 (GCF_963506605.1) 9 NC_083284.1 (48423057..48437826, complement)
    100 previous assembly UG_Zviv_1 (GCF_011800845.1) Linkage Group LG4 NC_048608.1 (45801564..45817031, complement)

    Chromosome 9 - NC_083284.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118083409 Neighboring gene vascular endothelial growth factor C Neighboring gene nei like DNA glycosylase 3 Neighboring gene U5 spliceosomal RNA Neighboring gene teneurin-3-like Neighboring gene motile sperm domain-containing protein 1-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein deglycosylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in lysosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_963506605.1-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference rZooViv1.1

    Genomic

    1. NC_083284.1 Reference rZooViv1.1

      Range
      48423057..48437826 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_060278717.1 → XP_060134700.1  LOW QUALITY PROTEIN: N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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