U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    CATSPERB cation channel sperm associated auxiliary subunit beta [ Mirounga leonina (Southern elephant seal) ]

    Gene ID: 118002274, updated on 20-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    CATSPERB
    Gene description
    cation channel sperm associated auxiliary subunit beta
    Locus tag
    GH733_002167
    See related
    EnsemblRapid:ENSMLOG00005006965
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Mirounga leonina
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Mirounga
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CATSPERB in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    100 current KU_Mleo_1.0 (GCF_011800145.1) Unplaced Scaffold NW_023270825.1 (12013026..12108395)

    NW_023270825.1Genomic Context describing neighboring genes Neighboring gene tandem C2 domains, nuclear Neighboring gene uncharacterized LOC118002688 Neighboring gene pyruvate dehydrogenase (acetyl-transferring) kinase isozyme 3, mitochondrial-like Neighboring gene U6 spliceosomal RNA Neighboring gene protein phosphatase 4 regulatory subunit 3A

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_023270825 Unplaced Scaffold Reference KU_Mleo_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    part_of CatSper complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cilium IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    cation channel sperm-associated protein subunit beta

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Mirounga leonina Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference KU_Mleo_1.0 Primary Assembly

    Genomic

    1. NW_023270825.1 Reference KU_Mleo_1.0 Primary Assembly

      Range
      12013026..12108395
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_034992627.1 → XP_034848518.1  cation channel sperm-associated protein subunit beta

      Related
      ENSMLOP00005009991.1, ENSMLOT00005011321.1
      Conserved Domains (1) summary
      pfam15149
      Location:572 → 1091
      CATSPERB; Cation channel sperm-associated protein subunit beta protein family
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.