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    LOC117997538 glutathione peroxidase 6-like [ Mirounga leonina (Southern elephant seal) ]

    Gene ID: 117997538, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC117997538
    Gene description
    glutathione peroxidase 6-like
    See related
    EnsemblRapid:ENSMLOG00005009496
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Mirounga leonina
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Mirounga
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    Genomic context

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    See LOC117997538 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    100 current KU_Mleo_1.0 (GCF_011800145.1) Unplaced Scaffold NW_023270709.1 (28447245..28456985, complement)

    NW_023270709.1Genomic Context describing neighboring genes Neighboring gene zinc finger and SCAN domain containing 23 Neighboring gene uncharacterized LOC117997540 Neighboring gene epididymal secretory glutathione peroxidase Neighboring gene oligosaccharyltransferase complex subunit OSTC-like Neighboring gene transfer RNA isoleucine (anticodon UAU)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_023270709 Unplaced Scaffold Reference KU_Mleo_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables glutathione peroxidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in response to oxidative stress IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    glutathione peroxidase 6-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Mirounga leonina Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference KU_Mleo_1.0 Primary Assembly

    Genomic

    1. NW_023270709.1 Reference KU_Mleo_1.0 Primary Assembly

      Range
      28447245..28456985 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_034985911.1 → XP_034841802.1  glutathione peroxidase 6-like isoform X2

      Related
      ENSMLOP00005013636.1, ENSMLOT00005015410.1
      Conserved Domains (1) summary
      cd00340
      Location:36 → 208
      GSH_Peroxidase; Glutathione (GSH) peroxidase family; tetrameric selenoenzymes that catalyze the reduction of a variety of hydroperoxides including lipid peroxidases, using GSH as a specific electron donor substrate. GSH peroxidase contains one selenocysteine residue per ...

    2. XM_034985910.1 → XP_034841801.1  glutathione peroxidase 6-like isoform X1

      Conserved Domains (1) summary
      cd00340
      Location:38 → 210
      GSH_Peroxidase; Glutathione (GSH) peroxidase family; tetrameric selenoenzymes that catalyze the reduction of a variety of hydroperoxides including lipid peroxidases, using GSH as a specific electron donor substrate. GSH peroxidase contains one selenocysteine residue per ...
    Nucleotide Protein
    Heading Accession and Version

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