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    ano5b anoctamin 5b [ Hippoglossus hippoglossus (Atlantic halibut) ]

    Gene ID: 117757575, updated on 19-Mar-2024

    Summary

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    Gene symbol
    ano5b
    Gene description
    anoctamin 5b
    See related
    EnsemblRapid:ENSHHIG00000006549
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Hippoglossus hippoglossus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Hippoglossus
    Orthologs
    zebrafish all
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    Genomic context

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    See ano5b in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    100 current fHipHip1.pri (GCF_009819705.1) 3 NC_047153.1 (11772054..11797105, complement)

    Chromosome 3 - NC_047153.1Genomic Context describing neighboring genes Neighboring gene growth arrest-specific 2b Neighboring gene solute carrier family 17 member 6b Neighboring gene immunoglobulin superfamily, DCC subclass, member 3 Neighboring gene cartilage intermediate layer protein, nucleotide pyrophosphohydrolase Neighboring gene eukaryotic translation initiation factor 3, subunit Jb

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_047153.1 Chromosome 3 Reference fHipHip1.pri Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chloride channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chloride transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    anoctamin-5b

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Hippoglossus hippoglossus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fHipHip1.pri Primary Assembly

    Genomic

    1. NC_047153.1 Reference fHipHip1.pri Primary Assembly

      Range
      11772054..11797105 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_034578840.1 → XP_034434731.1  anoctamin-5b isoform X2

      Related
      ENSHHIP00000018562.1, ENSHHIT00000018900.1

    2. XM_034578832.1 → XP_034434723.1  anoctamin-5b isoform X1

      Related
      ENSHHIP00000018561.1, ENSHHIT00000018899.1
    Nucleotide Protein
    Heading Accession and Version

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