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    CtBP C-terminal binding protein [ Thrips palmi ]

    Gene ID: 117653891, updated on 23-May-2024

    Summary

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    Gene symbol
    CtBP
    Gene description
    C-terminal binding protein
    See related
    EnsemblRapid:LOC117653891
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Thrips palmi
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Thysanoptera; Terebrantia; Thripoidea; Thripidae; Thrips
    Orthologs
    fruit fly all
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    Genomic context

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    See CtBP in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    100 current TpBJ-2018v1 (GCF_012932325.1) Unplaced Scaffold NW_023144635.1 (2142689..2183362, complement)

    NW_023144635.1Genomic Context describing neighboring genes Neighboring gene sperm flagellar protein 1-like Neighboring gene Cap methyltransferase 1 Neighboring gene tRNA pseudouridine(38/39) synthase Neighboring gene proline-rich transmembrane protein 3 Neighboring gene Alg3, alpha-1,3- mannosyltransferase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_023144635 Unplaced Scaffold Reference TpBJ-2018v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phylogenomics and the evolution of hemipteroid insects. Johnson KP, et al. Proc Natl Acad Sci U S A, 2018 Dec 11. PMID 30478043, Free PMC Article
    2. Phylogenomics resolves the timing and pattern of insect evolution. Misof B, et al. Science, 2014 Nov 7. PMID 25378627
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables NAD binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription corepressor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    C-terminal-binding protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Thrips palmi Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference TpBJ-2018v1 Primary Assembly

    Genomic

    1. NW_023144635.1 Reference TpBJ-2018v1 Primary Assembly

      Range
      2142689..2183362 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_034399885.1 → XP_034255776.1  C-terminal-binding protein isoform X1

      UniProtKB/TrEMBL
      A0A6P9AK03
      Related
      XP_034255776.1, XM_034399885.1
      Conserved Domains (2) summary
      cd05299
      Location:29 → 347
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor
      pfam03154
      Location:353 → 443
      Atrophin-1; Atrophin-1 family

    2. XM_034399883.1 → XP_034255774.1  C-terminal-binding protein isoform X1

      UniProtKB/TrEMBL
      A0A6P9AK03
      Related
      XP_034255774.1, XM_034399883.1
      Conserved Domains (2) summary
      cd05299
      Location:29 → 347
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor
      pfam03154
      Location:353 → 443
      Atrophin-1; Atrophin-1 family

    3. XM_034399884.1 → XP_034255775.1  C-terminal-binding protein isoform X1

      UniProtKB/TrEMBL
      A0A6P9AK03
      Related
      XP_034255775.1, XM_034399884.1
      Conserved Domains (2) summary
      cd05299
      Location:29 → 347
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor
      pfam03154
      Location:353 → 443
      Atrophin-1; Atrophin-1 family

    4. XM_034399886.1 → XP_034255777.1  C-terminal-binding protein isoform X2

      UniProtKB/TrEMBL
      A0A6P9ACB0
      Related
      XP_034255777.1, XM_034399886.1
      Conserved Domains (1) summary
      cd05299
      Location:29 → 347
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    5. XM_034399882.1 → XP_034255773.1  C-terminal-binding protein isoform X1

      UniProtKB/TrEMBL
      A0A6P9AK03
      Related
      XP_034255773.1, XM_034399882.1
      Conserved Domains (2) summary
      cd05299
      Location:29 → 347
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor
      pfam03154
      Location:353 → 443
      Atrophin-1; Atrophin-1 family

    6. XM_034399887.1 → XP_034255778.1  C-terminal-binding protein isoform X3

      UniProtKB/TrEMBL
      A0A6P9AC76
      Related
      XP_034255778.1, XM_034399887.1
      Conserved Domains (1) summary
      cd05299
      Location:29 → 347
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    7. XM_034399888.1 → XP_034255779.1  C-terminal-binding protein isoform X4

      UniProtKB/TrEMBL
      A0A6P9AEL8
      Related
      XP_034255779.1, XM_034399888.1
      Conserved Domains (1) summary
      cd05299
      Location:29 → 347
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    8. XM_034399890.1 → XP_034255781.1  C-terminal-binding protein isoform X6

      UniProtKB/TrEMBL
      A0A6P9AK07
      Related
      XP_034255781.1, XM_034399890.1
      Conserved Domains (1) summary
      cd05299
      Location:29 → 347
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    9. XM_034399889.1 → XP_034255780.1  C-terminal-binding protein isoform X5

      UniProtKB/TrEMBL
      A0A6P9AE81
      Related
      XP_034255780.1, XM_034399889.1
      Conserved Domains (1) summary
      cd05299
      Location:29 → 347
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor
    Nucleotide Protein
    Heading Accession and Version

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