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    LOC117434568 C-Jun-amino-terminal kinase-interacting protein 1-like [ Acipenser ruthenus (sterlet) ]

    Gene ID: 117434568, updated on 26-Oct-2023

    Summary

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    Gene symbol
    LOC117434568
    Gene description
    C-Jun-amino-terminal kinase-interacting protein 1-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Acipenser ruthenus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Acipenseridae; Acipenser
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    Genomic context

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    See LOC117434568 in Genome Data Viewer
    Location:
    chromosome: 28
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    RS_2023_08 current fAciRut3.2 maternal haplotype (GCF_902713425.1) 28 NC_081216.1 (24982206..25020450)
    101 previous assembly ASM1064508v1 (GCF_010645085.1) 26 NC_048348.1 (14691734..14731628)

    Chromosome 28 - NC_081216.1Genomic Context describing neighboring genes Neighboring gene carbohydrate sulfotransferase 1-like Neighboring gene GDP-fucose transporter 1-like Neighboring gene centriolar satellite-associated tubulin polyglutamylase complex regulator 1-like Neighboring gene low-density lipoprotein receptor-related protein 4-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of JNK cascade IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    C-Jun-amino-terminal kinase-interacting protein 1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_902713425.1-RS_2023_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fAciRut3.2 maternal haplotype Primary Assembly

    Genomic

    1. NC_081216.1 Reference fAciRut3.2 maternal haplotype Primary Assembly

      Range
      24982206..25020450
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_034057134.3 → XP_033913025.3  C-Jun-amino-terminal kinase-interacting protein 1-like isoform X1

    2. XM_034057137.3 → XP_033913028.3  C-Jun-amino-terminal kinase-interacting protein 1-like isoform X5

    3. XM_059003173.1 → XP_058859156.1  C-Jun-amino-terminal kinase-interacting protein 1-like isoform X3

    4. XM_034057136.3 → XP_033913027.3  C-Jun-amino-terminal kinase-interacting protein 1-like isoform X3

    5. XM_034057135.3 → XP_033913026.3  C-Jun-amino-terminal kinase-interacting protein 1-like isoform X2

    6. XM_059003174.1 → XP_058859157.1  C-Jun-amino-terminal kinase-interacting protein 1-like isoform X4

    Nucleotide Protein
    Heading Accession and Version

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