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    LOC117379948 fibroblast growth factor 12-like [ Periophthalmus magnuspinnatus ]

    Gene ID: 117379948, updated on 22-Oct-2024

    Summary

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    Gene symbol
    LOC117379948
    Gene description
    fibroblast growth factor 12-like
    See related
    EnsemblRapid:ENSPMGG00005000150
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Periophthalmus magnuspinnatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Gobiaria; Gobiiformes; Gobioidei; Gobiidae; Oxudercinae; Periophthalmus
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    Genomic context

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    See LOC117379948 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2023_04 current fPerMag1.2.pri (GCF_009829125.3) 13 NC_047138.1 (32276754..32299774, complement)
    100 previous assembly fPerMag1.pri (GCF_009829125.1) 13 NC_047138.1 (32277758..32298144, complement)

    Chromosome 13 - NC_047138.1Genomic Context describing neighboring genes Neighboring gene diacylglycerol kinase delta-like Neighboring gene coagulation factor X Neighboring gene nucleotidyltransferase MB21D2 Neighboring gene presenilin associated, rhomboid-like b

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables fibroblast growth factor receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables growth factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in animal organ morphogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in fibroblast growth factor receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of cell population proliferation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of gene expression IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    fibroblast growth factor 12-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_009829125.3-RS_2023_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fPerMag1.2.pri

    Genomic

    1. NC_047138.1 Reference fPerMag1.2.pri

      Range
      32276754..32299774 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_055226307.1 → XP_055082282.1  fibroblast growth factor 12-like isoform X1

      Related
      ENSPMGP00005000218.1, ENSPMGT00005000263.1

    2. XM_055226310.1 → XP_055082285.1  fibroblast growth factor 12-like isoform X4

    3. XM_055226309.1 → XP_055082284.1  fibroblast growth factor 12-like isoform X3

      Related
      ENSPMGP00005000220.1, ENSPMGT00005000265.1

    4. XM_055226308.1 → XP_055082283.1  fibroblast growth factor 12-like isoform X2

      Related
      ENSPMGP00005000221.1, ENSPMGT00005000266.1

    5. XM_033976642.2 → XP_033832533.1  fibroblast growth factor 12-like isoform X5

      Related
      ENSPMGP00005000217.1, ENSPMGT00005000262.1
      Conserved Domains (1) summary
      smart00442
      Location:14 → 144
      FGF; Acidic and basic fibroblast growth factor family
    Nucleotide Protein
    Heading Accession and Version

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