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    DENND2A DENN domain containing 2A [ Lacerta agilis ]

    Gene ID: 117054434, updated on 19-Mar-2024

    Summary

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    Gene symbol
    DENND2A
    Gene description
    DENN domain containing 2A
    See related
    EnsemblRapid:ENSLAGG00000017894
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Lacerta agilis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Lacerta
    Orthologs
    human mouse all
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    Genomic context

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    See DENND2A in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    100 current rLacAgi1.pri (GCF_009819535.1) 10 NC_046321.1 (20673248..20738066)

    Chromosome 10 - NC_046321.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117054114 Neighboring gene NADH:ubiquinone oxidoreductase subunit B2 Neighboring gene aarF domain containing kinase 2 Neighboring gene pseudouridine-metabolizing bifunctional protein C1861.05-like Neighboring gene makorin ring finger protein 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_046321.1 Chromosome 10 Reference rLacAgi1.pri Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in retrograde transport, endosome to Golgi IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in actin cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DENN domain-containing protein 2A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Lacerta agilis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference rLacAgi1.pri Primary Assembly

    Genomic

    1. NC_046321.1 Reference rLacAgi1.pri Primary Assembly

      Range
      20673248..20738066
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_033163245.1 → XP_033019136.1  DENN domain-containing protein 2A isoform X1

      Conserved Domains (3) summary
      smart00801
      Location:994 → 1060
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00800
      Location:658 → 753
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      pfam02141
      Location:760 → 919
      DENN; DENN (AEX-3) domain

    2. XM_033163249.1 → XP_033019140.1  DENN domain-containing protein 2A isoform X4

      Conserved Domains (3) summary
      smart00801
      Location:991 → 1057
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00800
      Location:658 → 750
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      pfam02141
      Location:757 → 916
      DENN; DENN (AEX-3) domain

    3. XM_033163248.1 → XP_033019139.1  DENN domain-containing protein 2A isoform X3

      Conserved Domains (3) summary
      smart00801
      Location:992 → 1058
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00800
      Location:656 → 751
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      pfam02141
      Location:758 → 917
      DENN; DENN (AEX-3) domain

    4. XM_033163252.1 → XP_033019143.1  DENN domain-containing protein 2A isoform X7

      Conserved Domains (3) summary
      smart00801
      Location:989 → 1055
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00800
      Location:656 → 748
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      pfam02141
      Location:755 → 914
      DENN; DENN (AEX-3) domain

    5. XM_033163246.1 → XP_033019137.1  DENN domain-containing protein 2A isoform X2

      Conserved Domains (3) summary
      smart00801
      Location:993 → 1059
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00800
      Location:657 → 752
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      pfam02141
      Location:759 → 918
      DENN; DENN (AEX-3) domain

    6. XM_033163251.1 → XP_033019142.1  DENN domain-containing protein 2A isoform X6

      Related
      ENSLAGP00000024828.1, ENSLAGT00000026638.1
      Conserved Domains (3) summary
      smart00801
      Location:990 → 1056
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00800
      Location:657 → 749
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      pfam02141
      Location:756 → 915
      DENN; DENN (AEX-3) domain

    7. XM_033163250.1 → XP_033019141.1  DENN domain-containing protein 2A isoform X5

      Conserved Domains (3) summary
      smart00801
      Location:991 → 1057
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00800
      Location:655 → 750
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      pfam02141
      Location:757 → 916
      DENN; DENN (AEX-3) domain

    8. XM_033163253.1 → XP_033019144.1  DENN domain-containing protein 2A isoform X8

      Conserved Domains (3) summary
      smart00801
      Location:988 → 1054
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00800
      Location:655 → 747
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      pfam02141
      Location:754 → 913
      DENN; DENN (AEX-3) domain
    Nucleotide Protein
    Heading Accession and Version

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