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    COG5 component of oligomeric golgi complex 5 [ Petromyzon marinus (sea lamprey) ]

    Gene ID: 116951308, updated on 1-Aug-2024

    Summary

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    Gene symbol
    COG5
    Gene description
    component of oligomeric golgi complex 5
    See related
    EnsemblRapid:ENSPMAG00000016348
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Petromyzon marinus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Cyclostomata; Hyperoartia; Petromyzontiformes; Petromyzontidae; Petromyzon
    Orthologs
    human mouse all
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    Genomic context

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    See COG5 in Genome Data Viewer
    Location:
    chromosome: 42
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    100 current kPetMar1.pri (GCF_010993605.1) 42 NC_046110.1 (11441667..11470402, complement)

    Chromosome 42 - NC_046110.1Genomic Context describing neighboring genes Neighboring gene protein tyrosine phosphatase domain containing 1 Neighboring gene RNA pseudouridine synthase D3 Neighboring gene MAP7 domain-containing protein 1-like Neighboring gene sodium- and chloride-dependent creatine transporter 1-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_046110.1 Chromosome 42 Reference kPetMar1.pri Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in intra-Golgi vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Golgi transport complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    conserved oligomeric Golgi complex subunit 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Petromyzon marinus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference kPetMar1.pri Primary Assembly

    Genomic

    1. NC_046110.1 Reference kPetMar1.pri Primary Assembly

      Range
      11441667..11470402 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032969850.1 → XP_032825741.1  conserved oligomeric Golgi complex subunit 5

      UniProtKB/TrEMBL
      A0AAJ7X912
      Related
      ENSPMAP00000012296.1, ENSPMAT00000085891.1
      Conserved Domains (2) summary
      pfam10392
      Location:41 → 163
      COG5; Golgi transport complex subunit 5
      TIGR02168
      Location:43 → 302
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    Nucleotide Protein
    Heading Accession and Version

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