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    LOC116925313 uncharacterized LOC116925313 [ Daphnia magna ]

    Gene ID: 116925313, updated on 30-Nov-2023

    Summary

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    Gene symbol
    LOC116925313
    Gene description
    uncharacterized LOC116925313
    See related
    EnsemblRapid:LOC116925313
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Daphnia magna
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Branchiopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia
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    Genomic context

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    See LOC116925313 in Genome Data Viewer
    Location:
    chromosome: LG1
    Exon count:
    2
    Annotation release Status Assembly LG Location
    101 current ASM2063170v1.1 (GCF_020631705.1) LG1 NC_059182.1 (6100907..6102587)
    100 previous assembly ASM399081v1 (GCF_003990815.1) LG1 NC_046174.1 (3729534..3731199)

    Linkage Group LG1 - NC_059182.1Genomic Context describing neighboring genes Neighboring gene DIS3-like exonuclease 2 Neighboring gene vacuolar protein sorting 52 Neighboring gene uncharacterized LOC116925361 Neighboring gene RNA polymerase-associated protein Ctr9

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATPase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in membrane organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC116925313
    Names
    Torsin-1A-interacting protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Daphnia magna Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM2063170v1.1 Primary Assembly

    Genomic

    1. NC_059182.1 Reference ASM2063170v1.1 Primary Assembly

      Range
      6100907..6102587
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032931996.2 → XP_032787887.2  uncharacterized protein LOC116925313

      Related
      XP_032787887.2, XM_032931996.2

    2. XM_032932002.2 → XP_032787893.2  uncharacterized protein LOC116925313

      Related
      XP_032787893.2, XM_032932002.2
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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