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    LMAN2L lectin, mannose binding 2 like [ Phocoena sinus (vaquita) ]

    Gene ID: 116764246, updated on 19-Jun-2024

    Summary

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    Gene symbol
    LMAN2L
    Gene description
    lectin, mannose binding 2 like
    See related
    Ensembl:ENSPSNG00000005472
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Phocoena sinus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Phocoena
    Orthologs
    human mouse all
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    Genomic context

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    See LMAN2L in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    100 current mPhoSin1.pri (GCF_008692025.1) 13 NC_045775.1 (81511175..81535989, complement)

    Chromosome 13 - NC_045775.1Genomic Context describing neighboring genes Neighboring gene KAT8 regulatory NSL complex subunit 3 Neighboring gene fer-1 like family member 5 Neighboring gene cyclin and CBS domain divalent metal cation transport mediator 4 Neighboring gene cyclin and CBS domain divalent metal cation transport mediator 3 Neighboring gene ankyrin repeat domain 23

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_045775.1 Chromosome 13 Reference mPhoSin1.pri

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables D-mannose binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in Golgi organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in endoplasmic reticulum organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in COPII-coated ER to Golgi transport vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in Golgi membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum-Golgi intermediate compartment IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    VIP36-like protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Phocoena sinus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mPhoSin1.pri

    Genomic

    1. NC_045775.1 Reference mPhoSin1.pri

      Range
      81511175..81535989 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032652668.1 → XP_032508559.1  VIP36-like protein isoform X4

      UniProtKB/TrEMBL
      A0A8C9BK89
      Related
      ENSPSNP00000007366.1, ENSPSNT00000008373.1
      Conserved Domains (1) summary
      cl14058
      Location:50 → 298
      lectin_L-type; legume lectins

    2. XM_032652669.1 → XP_032508560.1  VIP36-like protein isoform X5

      Conserved Domains (1) summary
      cl14058
      Location:18 → 265
      lectin_L-type; legume lectins

    3. XM_032652670.1 → XP_032508561.1  VIP36-like protein isoform X6

      Conserved Domains (1) summary
      cl14058
      Location:50 → 244
      lectin_L-type; legume lectins

    4. XM_032652667.1 → XP_032508558.1  VIP36-like protein isoform X3

      UniProtKB/TrEMBL
      A0A8C9BK89
      Conserved Domains (1) summary
      cl14058
      Location:50 → 298
      lectin_L-type; legume lectins

    5. XM_032652665.1 → XP_032508556.1  VIP36-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8C9BK89
      Conserved Domains (1) summary
      cl14058
      Location:50 → 309
      lectin_L-type; legume lectins

    6. XM_032652671.1 → XP_032508562.1  VIP36-like protein isoform X7

      UniProtKB/TrEMBL
      A0A8C9BK89
      Conserved Domains (1) summary
      cl14058
      Location:50 → 244
      lectin_L-type; legume lectins

    7. XM_032652666.1 → XP_032508557.1  VIP36-like protein isoform X2

      UniProtKB/TrEMBL
      A0A8C9BK89, A0A8C9DZT9
      Related
      ENSPSNP00000007393.1, ENSPSNT00000008401.1
      Conserved Domains (1) summary
      cl14058
      Location:50 → 309
      lectin_L-type; legume lectins
    Nucleotide Protein
    Heading Accession and Version

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