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    LOC116473172 torsin-1A-interacting protein 2 [ Hylobates moloch (silvery gibbon) ]

    Gene ID: 116473172, updated on 26-Oct-2023

    Summary

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    Gene symbol
    LOC116473172
    Gene description
    torsin-1A-interacting protein 2
    See related
    EnsemblRapid:ENSHMOG00010008514
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Hylobates moloch
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Hylobates
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    Genomic context

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    See LOC116473172 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2023_07 current HMol_V3 (GCF_009828535.3) Unplaced Scaffold NW_026652283.1 (53939746..53986954)
    100 previous assembly HMol (GCF_009828535.1) Unplaced Scaffold NW_022454853.1 (53939321..53975852)

    NW_026652283.1Genomic Context describing neighboring genes Neighboring gene centrosomal protein 350 Neighboring gene small ribosomal subunit protein eS24-like Neighboring gene torsin 1A interacting protein 1 Neighboring gene torsin-1A-interacting protein 2 Neighboring gene family with sequence similarity 163 member A Neighboring gene uncharacterized LOC131384106 Neighboring gene tudor domain containing 5

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATPase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in endoplasmic reticulum organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in membrane organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    torsin-1A-interacting protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_009828535.3-RS_2023_07

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference HMol_V3

    Genomic

    1. NW_026652283.1 Reference HMol_V3

      Range
      53939746..53986954
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032160870.2 → XP_032016761.1  torsin-1A-interacting protein 2

      Conserved Domains (1) summary
      pfam05609
      Location:15 → 466
      LAP1C; Lamina-associated polypeptide 1C (LAP1C)

    2. XM_032160869.2 → XP_032016760.1  torsin-1A-interacting protein 2

      Conserved Domains (1) summary
      pfam05609
      Location:15 → 466
      LAP1C; Lamina-associated polypeptide 1C (LAP1C)

    3. XM_058442777.1 → XP_058298760.1  torsin-1A-interacting protein 2

      Related
      ENSHMOP00010009502.1, ENSHMOT00010012621.1

    4. XM_058442776.1 → XP_058298759.1  torsin-1A-interacting protein 2

    5. XM_058442778.1 → XP_058298761.1  torsin-1A-interacting protein 2

    6. XM_032160871.2 → XP_032016762.1  torsin-1A-interacting protein 2

      Conserved Domains (1) summary
      pfam05609
      Location:15 → 466
      LAP1C; Lamina-associated polypeptide 1C (LAP1C)
    Nucleotide Protein
    Heading Accession and Version

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