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    FXN frataxin [ Phasianus colchicus (ring-necked pheasant) ]

    Gene ID: 116238857, updated on 27-Jul-2024

    Summary

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    Gene symbol
    FXN
    Gene description
    frataxin
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Phasianus colchicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Phasianus
    Orthologs
    human mouse all
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    Genomic context

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    See FXN in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    100 current ASM414374v1 (GCF_004143745.1) Unplaced Scaffold NW_022206018.1 (1594102..1608029, complement)

    NW_022206018.1Genomic Context describing neighboring genes Neighboring gene amyloid beta precursor protein binding family A member 1 Neighboring gene endosomal transmembrane epsin interactor 1 Neighboring gene tight junction protein 2 Neighboring gene phosphatidylinositol-4-phosphate 5-kinase type 1 beta Neighboring gene riboflavin kinase-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_022206018 Unplaced Scaffold Reference ASM414374v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 2 iron, 2 sulfur cluster binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ferric iron binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ferrous iron binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ferroxidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables iron chaperone activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular iron ion homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in iron incorporation into metallo-sulfur cluster IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    frataxin, mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Phasianus colchicus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM414374v1 Primary Assembly

    Genomic

    1. NW_022206018.1 Reference ASM414374v1 Primary Assembly

      Range
      1594102..1608029 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031608766.1 → XP_031464626.1  frataxin, mitochondrial

      Conserved Domains (1) summary
      TIGR03422
      Location:78 → 175
      mito_frataxin; frataxin
    Nucleotide Protein
    Heading Accession and Version

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