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    CCL20 C-C motif chemokine ligand 20 [ Phasianus colchicus (ring-necked pheasant) ]

    Gene ID: 116230831, updated on 27-Jul-2024

    Summary

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    Gene symbol
    CCL20
    Gene description
    C-C motif chemokine ligand 20
    See related
    Ensembl:ENSPCLG00000008103
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Phasianus colchicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Phasianus
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: Un
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    100 current ASM414374v1 (GCF_004143745.1) Unplaced Scaffold NW_022205395.1 (3643618..3645850, complement)

    NW_022205395.1Genomic Context describing neighboring genes Neighboring gene SPHK1 interactor, AKAP domain containing Neighboring gene dynein assembly factor with WD repeats 1 Neighboring gene thiamine transporter 2-like Neighboring gene thiamine transporter 2-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_022205395 Unplaced Scaffold Reference ASM414374v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables CCR chemokine receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables chemokine activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cellular response to interleukin-1 IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cellular response to tumor necrosis factor IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cellular response to type II interferon IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in chemokine-mediated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in inflammatory response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in lymphocyte chemotaxis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in monocyte chemotaxis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neutrophil chemotaxis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of ERK1 and ERK2 cascade IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    C-C motif chemokine 20

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Phasianus colchicus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM414374v1 Primary Assembly

    Genomic

    1. NW_022205395.1 Reference ASM414374v1 Primary Assembly

      Range
      3643618..3645850 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031596209.1 → XP_031452069.1  C-C motif chemokine 20

      UniProtKB/TrEMBL
      A0A669PUA3
      Related
      ENSPCLP00000009848.1, ENSPCLT00000013266.1
      Conserved Domains (1) summary
      cd01119
      Location:32 → 92
      Chemokine_CC_DCCL; subgroup of the Chemokine_CC subgroup based on the presence of a DCCL motif involving the two N-terminal cysteine residues; includes a number of small inducible cytokines capable of reversibly inhibiting normal hematopoietic progenitor proliferation by ...
    Nucleotide Protein
    Heading Accession and Version

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