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    Nup107 nucleoporin 107 [ Mastomys coucha (southern multimammate mouse) ]

    Gene ID: 116075989, updated on 18-Mar-2024

    Summary

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    Gene symbol
    Nup107
    Gene description
    nucleoporin 107
    See related
    EnsemblRapid:ENSMCUG00000006210
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Mastomys coucha
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mastomys
    Orthologs
    human mouse all
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    Genomic context

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    See Nup107 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    29
    Annotation release Status Assembly Chr Location
    100 current UCSF_Mcou_1 (GCF_008632895.1) Unplaced Scaffold NW_022196910.1 (44904390..44947727, complement)

    NW_022196910.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S2-like Neighboring gene solute carrier family 35 member E3 Neighboring gene uncharacterized LOC116075992 Neighboring gene RAP1B, member of RAS oncogene family Neighboring gene uncharacterized LOC116076097 Neighboring gene uncharacterized LOC116076098

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_022196910 Unplaced Scaffold Reference UCSF_Mcou_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables structural constituent of nuclear pore IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mRNA export from nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein import into nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of nuclear pore IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of nuclear pore outer ring IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nuclear pore complex protein Nup107

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Mastomys coucha Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCSF_Mcou_1 Primary Assembly

    Genomic

    1. NW_022196910.1 Reference UCSF_Mcou_1 Primary Assembly

      Range
      44904390..44947727 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031349534.1 → XP_031205394.1  nuclear pore complex protein Nup107 isoform X1

      Related
      ENSMCUP00000007111.1, ENSMCUT00000008987.1
      Conserved Domains (1) summary
      pfam04121
      Location:210 → 908
      Nup84_Nup100; Nuclear pore protein 84 / 107

    2. XM_031349535.1 → XP_031205395.1  nuclear pore complex protein Nup107 isoform X2

      Conserved Domains (1) summary
      pfam04121
      Location:181 → 879
      Nup84_Nup100; Nuclear pore protein 84 / 107
    Nucleotide Protein
    Heading Accession and Version

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