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    sfrp5 secreted frizzled-related protein 5 [ Chanos chanos (milkfish) ]

    Gene ID: 115810477, updated on 17-Mar-2024

    Summary

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    Gene symbol
    sfrp5
    Gene description
    secreted frizzled-related protein 5
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Chanos chanos
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Gonorynchiformes; Chanidae; Chanos
    Orthologs
    human zebrafish all
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    Genomic context

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    See sfrp5 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    100 current fChaCha1.1 (GCF_902362185.1) 4 NC_044498.1 (49230150..49247152)

    Chromosome 4 - NC_044498.1Genomic Context describing neighboring genes Neighboring gene cartilage acidic protein 1b Neighboring gene golgin A7 family, member Bb Neighboring gene zinc finger protein Neighboring gene MARVEL domain containing 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_044498.1 Chromosome 4 Reference fChaCha1.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables Wnt-protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in canonical Wnt signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of canonical Wnt signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in non-canonical Wnt signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    secreted frizzled-related protein 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Chanos chanos Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fChaCha1.1 Primary Assembly

    Genomic

    1. NC_044498.1 Reference fChaCha1.1 Primary Assembly

      Range
      49230150..49247152
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030772410.1 → XP_030628270.1  secreted frizzled-related protein 5

      UniProtKB/TrEMBL
      A0A6J2V5M8
      Conserved Domains (2) summary
      cd07444
      Location:49 → 175
      CRD_SFRP5; Cysteine-rich domain of the secreted frizzled-related protein 5 (SFRP5), a regulator of Wnt activity
      cd03580
      Location:180 → 305
      NTR_Sfrp1_like; NTR domain, Secreted frizzled-related protein (Sfrp) 1-like subfamily; composed of proteins similar to human Sfrp1, Sfrp2 and Sfrp5. Sfrps are soluble proteins containing an NTR domain C-terminal to a cysteine-rich Frizzled domain. They show diverse ...
    Nucleotide Protein
    Heading Accession and Version

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