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    CACNG5 calcium voltage-gated channel auxiliary subunit gamma 5 [ Strigops habroptila (Kakapo) ]

    Gene ID: 115616729, updated on 3-Aug-2024

    Summary

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    Gene symbol
    CACNG5
    Gene description
    calcium voltage-gated channel auxiliary subunit gamma 5
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Strigops habroptila
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Strigops
    Orthologs
    human mouse all
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    Genomic context

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    See CACNG5 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    101 current bStrHab1.2.pri (GCF_004027225.2) 14 NC_044290.2 (9535492..9559085, complement)
    100 previous assembly bStrHab1_v1.p (GCF_004027225.1) 15 NC_044291.1 (9535492..9559085, complement)

    Chromosome 14 - NC_044290.2Genomic Context describing neighboring genes Neighboring gene calcium voltage-gated channel auxiliary subunit gamma 1 Neighboring gene calcium voltage-gated channel auxiliary subunit gamma 4 Neighboring gene protein kinase C alpha Neighboring gene apolipoprotein H

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables channel regulator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables voltage-gated calcium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in calcium ion transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neurotransmitter receptor internalization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neurotransmitter receptor transport, postsynaptic endosome to lysosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of synaptic transmission, glutamatergic IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in postsynaptic neurotransmitter receptor diffusion trapping IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of AMPA receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transmission of nerve impulse IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of AMPA glutamate receptor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in postsynaptic density membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    voltage-dependent calcium channel gamma-5 subunit

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Strigops habroptila Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bStrHab1.2.pri

    Genomic

    1. NC_044290.2 Reference bStrHab1.2.pri

      Range
      9535492..9559085 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030506391.1 → XP_030362251.1  voltage-dependent calcium channel gamma-5 subunit

      UniProtKB/TrEMBL
      A0A672VC82
      Conserved Domains (1) summary
      cl21598
      Location:22 → 199
      PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

    2. XM_030506384.1 → XP_030362244.1  voltage-dependent calcium channel gamma-5 subunit

      UniProtKB/TrEMBL
      A0A672VC82
      Conserved Domains (1) summary
      cl21598
      Location:22 → 199
      PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

    3. XM_030506390.1 → XP_030362250.1  voltage-dependent calcium channel gamma-5 subunit

      UniProtKB/TrEMBL
      A0A672VC82
      Conserved Domains (1) summary
      cl21598
      Location:22 → 199
      PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

    4. XM_030506388.1 → XP_030362248.1  voltage-dependent calcium channel gamma-5 subunit

      UniProtKB/TrEMBL
      A0A672VC82
      Conserved Domains (1) summary
      cl21598
      Location:22 → 199
      PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

    5. XM_030506389.1 → XP_030362249.1  voltage-dependent calcium channel gamma-5 subunit

      UniProtKB/TrEMBL
      A0A672VC82
      Conserved Domains (1) summary
      cl21598
      Location:22 → 199
      PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

    6. XM_030506386.1 → XP_030362246.1  voltage-dependent calcium channel gamma-5 subunit

      UniProtKB/TrEMBL
      A0A672VC82
      Conserved Domains (1) summary
      cl21598
      Location:22 → 199
      PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

    7. XM_030506385.1 → XP_030362245.1  voltage-dependent calcium channel gamma-5 subunit

      UniProtKB/TrEMBL
      A0A672VC82
      Conserved Domains (1) summary
      cl21598
      Location:22 → 199
      PMP22_Claudin; PMP-22/EMP/MP20/Claudin family
    Nucleotide Protein
    Heading Accession and Version

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