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    b4galt6 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6 [ Gadus morhua (Atlantic cod) ]

    Gene ID: 115555303, updated on 17-Mar-2024

    Summary

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    Gene symbol
    b4galt6
    Gene description
    UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6
    See related
    Ensembl:ENSGMOG00000016633
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gadus morhua
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Zeiogadaria; Gadariae; Gadiformes; Gadoidei; Gadidae; Gadus
    Orthologs
    human zebrafish all
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    Genomic context

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    See b4galt6 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    100 current gadMor3.0 (GCF_902167405.1) 12 NC_044059.1 (22893126..22906412, complement)

    Chromosome 12 - NC_044059.1Genomic Context describing neighboring genes Neighboring gene meprin A subunit beta-like Neighboring gene uncharacterized LOC115555320 Neighboring gene trafficking protein particle complex subunit 8 Neighboring gene opsin 7, group member a Neighboring gene TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor Neighboring gene BTB/POZ domain-containing protein KCTD1-like Neighboring gene aquaporin-4-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_044059.1 Chromosome 12 Reference gadMor3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables UDP-galactose:glucosylceramide beta-1,4-galactosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in glycosphingolipid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    beta-1,4-galactosyltransferase 6-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gadus morhua Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference gadMor3.0 Primary Assembly

    Genomic

    1. NC_044059.1 Reference gadMor3.0 Primary Assembly

      Range
      22893126..22906412 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030372113.1 → XP_030227973.1  beta-1,4-galactosyltransferase 6-like

      UniProtKB/TrEMBL
      A0A8C5CXG7
      Related
      ENSGMOP00000066674.1, ENSGMOT00000067403.1
      Conserved Domains (1) summary
      cd00899
      Location:155 → 371
      b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
    Nucleotide Protein
    Heading Accession and Version

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