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    LOC115554024 riboflavin transporter 2-like [ Gadus morhua (Atlantic cod) ]

    Gene ID: 115554024, updated on 23-Oct-2023

    Summary

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    Gene symbol
    LOC115554024
    Gene description
    riboflavin transporter 2-like
    See related
    Ensembl:ENSGMOG00000006625
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gadus morhua
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Zeiogadaria; Gadariae; Gadiformes; Gadoidei; Gadidae; Gadus
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    Genomic context

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    See LOC115554024 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    100 current gadMor3.0 (GCF_902167405.1) 11 NC_044058.1 (16208595..16214473)

    Chromosome 11 - NC_044058.1Genomic Context describing neighboring genes Neighboring gene dystonin-like Neighboring gene dystonin-like Neighboring gene microtubule-actin cross-linking factor 1-like Neighboring gene nuclear factor of activated T cells 1 Neighboring gene spalt-like transcription factor 3a

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_044058.1 Chromosome 11 Reference gadMor3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables riboflavin transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in riboflavin transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    riboflavin transporter 2-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gadus morhua Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference gadMor3.0 Primary Assembly

    Genomic

    1. NC_044058.1 Reference gadMor3.0 Primary Assembly

      Range
      16208595..16214473
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030370616.1 → XP_030226476.1  riboflavin transporter 2-like

      UniProtKB/TrEMBL
      A0A8C4Z648
      Conserved Domains (1) summary
      pfam06237
      Location:289 → 383
      DUF1011; Protein of unknown function (DUF1011)

    2. XM_030370614.1 → XP_030226474.1  riboflavin transporter 2-like

      UniProtKB/TrEMBL
      A0A8C4Z648
      Related
      ENSGMOP00000007039.1, ENSGMOT00000007240.2
      Conserved Domains (1) summary
      pfam06237
      Location:289 → 383
      DUF1011; Protein of unknown function (DUF1011)

    3. XM_030370615.1 → XP_030226475.1  riboflavin transporter 2-like

      UniProtKB/TrEMBL
      A0A8C4Z648
      Conserved Domains (1) summary
      pfam06237
      Location:289 → 383
      DUF1011; Protein of unknown function (DUF1011)

    4. XM_030370613.1 → XP_030226473.1  riboflavin transporter 2-like

      UniProtKB/TrEMBL
      A0A8C4Z648
      Conserved Domains (1) summary
      pfam06237
      Location:289 → 383
      DUF1011; Protein of unknown function (DUF1011)
    Nucleotide Protein
    Heading Accession and Version

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