U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    gprc6a G protein-coupled receptor, class C, group 6, member A [ Gadus morhua (Atlantic cod) ]

    Gene ID: 115553853, updated on 17-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    gprc6a
    Gene description
    G protein-coupled receptor, class C, group 6, member A
    See related
    Ensembl:ENSGMOG00000007217
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gadus morhua
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Zeiogadaria; Gadariae; Gadiformes; Gadoidei; Gadidae; Gadus
    Orthologs
    human zebrafish all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See gprc6a in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    100 current gadMor3.0 (GCF_902167405.1) 11 NC_044058.1 (17094422..17098524, complement)

    Chromosome 11 - NC_044058.1Genomic Context describing neighboring genes Neighboring gene zinc finger containing ubiquitin peptidase 1 Neighboring gene karyopherin alpha 5 (importin alpha 6) Neighboring gene vascular endothelial growth factor Aa Neighboring gene uncharacterized LOC115554694

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_044058.1 Chromosome 11 Reference gadMor3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    G-protein coupled receptor family C group 6 member A

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Gadus morhua Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference gadMor3.0 Primary Assembly

    Genomic

    1. NC_044058.1 Reference gadMor3.0 Primary Assembly

      Range
      17094422..17098524 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030370377.1 → XP_030226237.1  G-protein coupled receptor family C group 6 member A

      UniProtKB/TrEMBL
      A0A8C5F5U9
      Related
      ENSGMOP00000007790.2, ENSGMOT00000008012.2
      Conserved Domains (4) summary
      cd14964
      Location:586 → 611
      7tm_GPCRs; TM helix 1 [structural motif]
      pfam07562
      Location:513 → 566
      NCD3G; Nine Cysteines Domain of family 3 GPCR
      cl10011
      Location:40 → 497
      Periplasmic_Binding_Protein_type1; Type 1 periplasmic binding fold superfamily
      cl28897
      Location:586 → 833
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.