U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    dnaja DnaJ heat shock protein family (Hsp40) member A [ Gadus morhua (Atlantic cod) ]

    Gene ID: 115550406, updated on 17-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    dnaja
    Gene description
    DnaJ heat shock protein family (Hsp40) member A
    See related
    Ensembl:ENSGMOG00000013423
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gadus morhua
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Zeiogadaria; Gadariae; Gadiformes; Gadoidei; Gadidae; Gadus
    Orthologs
    zebrafish all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See dnaja in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    100 current gadMor3.0 (GCF_902167405.1) 9 NC_044056.1 (21754398..21761166, complement)

    Chromosome 9 - NC_044056.1Genomic Context describing neighboring genes Neighboring gene Kruppel-like factor 13 Neighboring gene transient receptor potential cation channel subfamily M member 1-like Neighboring gene ras-related protein Rab-8B-like Neighboring gene ribosomal protein S27 like Neighboring gene isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha Neighboring gene leucine rich repeat containing 61

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_044056.1 Chromosome 9 Reference gadMor3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables Hsp70 protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables unfolded protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein refolding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to heat IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    dnaJ homolog subfamily A member 1-like

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Gadus morhua Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference gadMor3.0 Primary Assembly

    Genomic

    1. NC_044056.1 Reference gadMor3.0 Primary Assembly

      Range
      21754398..21761166 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030365398.1 → XP_030221258.1  dnaJ homolog subfamily A member 1-like

      UniProtKB/TrEMBL
      A0A8C4ZHW0
      Related
      ENSGMOP00000014349.1, ENSGMOT00000014719.2
      Conserved Domains (1) summary
      PTZ00037
      Location:2 → 395
      PTZ00037; DnaJ_C chaperone protein; Provisional
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.