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    bmpr1ba bone morphogenetic protein receptor, type IBa [ Gadus morhua (Atlantic cod) ]

    Gene ID: 115545095, updated on 17-Mar-2024

    Summary

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    Gene symbol
    bmpr1ba
    Gene description
    bone morphogenetic protein receptor, type IBa
    See related
    Ensembl:ENSGMOG00000005746
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gadus morhua
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Zeiogadaria; Gadariae; Gadiformes; Gadoidei; Gadidae; Gadus
    Also known as
    bmpr1b
    Orthologs
    human zebrafish all
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    Genomic context

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    See bmpr1ba in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    100 current gadMor3.0 (GCF_902167405.1) 6 NC_044053.1 (8728117..8791485)

    Chromosome 6 - NC_044053.1Genomic Context describing neighboring genes Neighboring gene melanopsin-A Neighboring gene PDZ and LIM domain 5a Neighboring gene unc-5 netrin receptor C Neighboring gene sperm-tail PG-rich repeat containing 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_044053.1 Chromosome 6 Reference gadMor3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables SMAD binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transforming growth factor beta receptor activity, type I IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in BMP signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cellular response to growth factor stimulus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in dorsal/ventral pattern formation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of receptor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    bone morphogenetic protein receptor type-1B
    Names
    bone morphogenetic protein receptor type 1B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gadus morhua Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference gadMor3.0 Primary Assembly

    Genomic

    1. NC_044053.1 Reference gadMor3.0 Primary Assembly

      Range
      8728117..8791485
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030357911.1 → XP_030213771.1  bone morphogenetic protein receptor type-1B isoform X2

      UniProtKB/TrEMBL
      A0A8C4Z2V9
      Related
      ENSGMOP00000064796.1, ENSGMOT00000033049.1
      Conserved Domains (3) summary
      pfam01064
      Location:76 → 151
      Activin_recp; Activin types I and II receptor domain
      pfam08515
      Location:220 → 247
      TGF_beta_GS; Transforming growth factor beta type I GS-motif
      cl21453
      Location:243 → 547
      PKc_like; Protein Kinases, catalytic domain

    2. XM_030357910.1 → XP_030213770.1  bone morphogenetic protein receptor type-1B isoform X1

      UniProtKB/TrEMBL
      A0A8C4Z2V9, A0A8C5CRX1
      Related
      ENSGMOP00000063918.1, ENSGMOT00000032327.1
      Conserved Domains (3) summary
      pfam01064
      Location:76 → 151
      Activin_recp; Activin types I and II receptor domain
      pfam08515
      Location:220 → 247
      TGF_beta_GS; Transforming growth factor beta type I GS-motif
      cl21453
      Location:243 → 549
      PKc_like; Protein Kinases, catalytic domain

    3. XM_030357913.1 → XP_030213773.1  bone morphogenetic protein receptor type-1B isoform X3

      UniProtKB/TrEMBL
      A0A8C4Z2V9
      Related
      ENSGMOP00000006114.2, ENSGMOT00000006290.2
      Conserved Domains (3) summary
      pfam01064
      Location:31 → 106
      Activin_recp; Activin types I and II receptor domain
      pfam08515
      Location:175 → 202
      TGF_beta_GS; Transforming growth factor beta type I GS-motif
      cl21453
      Location:198 → 504
      PKc_like; Protein Kinases, catalytic domain
    Nucleotide Protein
    Heading Accession and Version

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