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    mchr1a melanin-concentrating hormone receptor 1a [ Gadus morhua (Atlantic cod) ]

    Gene ID: 115540269, updated on 17-Mar-2024

    Summary

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    Gene symbol
    mchr1a
    Gene description
    melanin-concentrating hormone receptor 1a
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gadus morhua
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Zeiogadaria; Gadariae; Gadiformes; Gadoidei; Gadidae; Gadus
    Orthologs
    zebrafish all
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    Genomic context

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    See mchr1a in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    100 current gadMor3.0 (GCF_902167405.1) 3 NC_044050.1 (6805784..6815897, complement)

    Chromosome 3 - NC_044050.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115540636 Neighboring gene cilia and flagella associated protein 52 Neighboring gene ubiquitin specific peptidase 43a Neighboring gene golgi associated, gamma adaptin ear containing, ARF binding protein 3a Neighboring gene small ubiquitin like modifier 2a

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_044050.1 Chromosome 3 Reference gadMor3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables melanin-concentrating hormone receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables neuropeptide binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in neuropeptide signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in neuron projection IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    melanin-concentrating hormone receptor 1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gadus morhua Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference gadMor3.0 Primary Assembly

    Genomic

    1. NC_044050.1 Reference gadMor3.0 Primary Assembly

      Range
      6805784..6815897 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030351413.1 → XP_030207273.1  melanin-concentrating hormone receptor 1-like

      UniProtKB/TrEMBL
      A0A8C4ZT59
      Conserved Domains (2) summary
      cd14964
      Location:36 → 62
      7tm_GPCRs; TM helix 1 [structural motif]
      cl28897
      Location:36 → 316
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
    Nucleotide Protein
    Heading Accession and Version

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