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    LOC115531179 NLR family CARD domain-containing protein 3-like [ Gadus morhua (Atlantic cod) ]

    Gene ID: 115531179, updated on 23-Oct-2023

    Summary

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    Gene symbol
    LOC115531179
    Gene description
    NLR family CARD domain-containing protein 3-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gadus morhua
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Zeiogadaria; Gadariae; Gadiformes; Gadoidei; Gadidae; Gadus
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    Genomic context

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    See LOC115531179 in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    100 current gadMor3.0 (GCF_902167405.1) 18 NC_044065.1 (3324260..3332959)

    Chromosome 18 - NC_044065.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115531178 Neighboring gene NLR family CARD domain-containing protein 3-like Neighboring gene IKAROS family zinc finger 5 Neighboring gene acyl-CoA dehydrogenase short/branched chain

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_044065.1 Chromosome 18 Reference gadMor3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    NLR family CARD domain-containing protein 3-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gadus morhua Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference gadMor3.0 Primary Assembly

    Genomic

    1. NC_044065.1 Reference gadMor3.0 Primary Assembly

      Range
      3324260..3332959
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030340294.1 → XP_030196154.1  NLR family CARD domain-containing protein 3-like

      Conserved Domains (4) summary
      pfam05729
      Location:104 → 271
      NACHT; NACHT domain
      pfam14484
      Location:31 → 93
      FISNA; Fish-specific NACHT associated domain
      pfam17776
      Location:419 → 561
      NLRC4_HD2; NLRC4 helical domain HD2
      pfam17779
      Location:357 → 417
      NOD2_WH; NOD2 winged helix domain
    Nucleotide Protein
    Heading Accession and Version

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