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    nkd1 NKD inhibitor of WNT signaling pathway 1 [ Perca flavescens (yellow perch) ]

    Gene ID: 114555932, updated on 15-Mar-2024

    Summary

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    Gene symbol
    nkd1
    Gene description
    NKD inhibitor of WNT signaling pathway 1
    Locus tag
    EPR50_G00007370
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Perca flavescens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Percinae; Perca
    Orthologs
    human zebrafish all
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    Genomic context

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    See nkd1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    100 current PFLA_1.0 (GCF_004354835.1) 1 NC_041331.1 (35125806..35162187, complement)

    Chromosome 1 - NC_041331.1Genomic Context describing neighboring genes Neighboring gene cylindromatosis (turban tumor syndrome), a Neighboring gene nucleotide-binding oligomerization domain containing 2 Neighboring gene bromodomain containing 7 Neighboring gene adenylate cyclase 7

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_041331.1 Chromosome 1 Reference PFLA_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of Wnt signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein naked cuticle homolog 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Perca flavescens Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference PFLA_1.0 Primary Assembly

    Genomic

    1. NC_041331.1 Reference PFLA_1.0 Primary Assembly

      Range
      35125806..35162187 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028578708.1 → XP_028434509.1  protein naked cuticle homolog 1

      UniProtKB/TrEMBL
      A0A484DRG6
      Conserved Domains (1) summary
      pfam03154
      Location:174 → 408
      Atrophin-1; Atrophin-1 family
    Nucleotide Protein
    Heading Accession and Version

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