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    LOC11444209 serine/threonine-protein kinase STY13 [ Medicago truncatula (barrel medic) ]

    Gene ID: 11444209, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC11444209
    Gene description
    serine/threonine-protein kinase STY13
    Locus tag
    MtrunA17_Chr5g0394681
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Medicago truncatula
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
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    Genomic context

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    See LOC11444209 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    102 current MtrunA17r5.0-ANR (GCF_003473485.1) 5 NC_053046.1 (995668..1000533)
    101 previous assembly MedtrA17_4.0 (GCF_000219495.3) 5 NC_016411.2 (981858..986658)

    Chromosome 5 - NC_053046.1Genomic Context describing neighboring genes Neighboring gene protein tesmin/TSO1-like CXC 2 Neighboring gene uncharacterized LOC11440424 Neighboring gene pentatricopeptide repeat-containing protein At3g22690 Neighboring gene uncharacterized LOC11441094

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Dual RNA-Seq analysis of Medicago truncatula and the pea powdery mildew Erysiphe pisi uncovers distinct host transcriptional signatures during incompatible and compatible interactions and pathogen effector candidates. Gupta M, et al. Genomics, 2020 May. PMID 31837401
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    serine/threonine-protein kinase STY13
    Names
    Serine/Threonine kinase family protein
    putative dual-specificity kinase TKL-Pl-4 family

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Medicago truncatula Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference MtrunA17r5.0-ANR Primary Assembly

    Genomic

    1. NC_053046.1 Reference MtrunA17r5.0-ANR Primary Assembly

      Range
      995668..1000533
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024783204.2 → XP_024638972.1  serine/threonine-protein kinase STY13

      UniProtKB/TrEMBL
      A0A072UCP9, G7K3Q2
      Conserved Domains (1) summary
      cd13999
      Location:89 → 361
      STKc_MAP3K-like; Catalytic domain of Mitogen-Activated Protein Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases

    2. XM_024783200.2 → XP_024638968.1  serine/threonine-protein kinase STY13

      UniProtKB/TrEMBL
      A0A072UCP9, G7K3Q2
      Conserved Domains (1) summary
      cd13999
      Location:89 → 361
      STKc_MAP3K-like; Catalytic domain of Mitogen-Activated Protein Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases

    3. XM_024783201.2 → XP_024638969.1  serine/threonine-protein kinase STY13

      UniProtKB/TrEMBL
      A0A072UCP9, G7K3Q2
      Conserved Domains (1) summary
      cd13999
      Location:89 → 361
      STKc_MAP3K-like; Catalytic domain of Mitogen-Activated Protein Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases

    4. XM_039834584.1 → XP_039690518.1  serine/threonine-protein kinase STY13

      UniProtKB/TrEMBL
      A0A072UCP9, G7K3Q2
      Conserved Domains (1) summary
      cd13999
      Location:89 → 361
      STKc_MAP3K-like; Catalytic domain of Mitogen-Activated Protein Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases

    5. XM_024783203.2 → XP_024638971.1  serine/threonine-protein kinase STY13

      UniProtKB/TrEMBL
      A0A072UCP9, G7K3Q2
      Conserved Domains (1) summary
      cd13999
      Location:89 → 361
      STKc_MAP3K-like; Catalytic domain of Mitogen-Activated Protein Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases
    Nucleotide Protein
    Heading Accession and Version

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