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    LOC11440839 anaphase-promoting complex subunit 7 [ Medicago truncatula (barrel medic) ]

    Gene ID: 11440839, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC11440839
    Gene description
    anaphase-promoting complex subunit 7
    Locus tag
    MtrunA17_Chr2g0286231
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Medicago truncatula
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
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    Genomic context

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    See LOC11440839 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    102 current MtrunA17r5.0-ANR (GCF_003473485.1) 2 NC_053043.1 (6619386..6626844)
    101 previous assembly MedtrA17_4.0 (GCF_000219495.3) 2 NC_016408.2 (6546202..6553649)

    Chromosome 2 - NC_053043.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC11445633 Neighboring gene uncharacterized LOC11446118 Neighboring gene acyl-CoA-binding domain-containing protein 6 Neighboring gene monothiol glutaredoxin-S2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Dual RNA-Seq analysis of Medicago truncatula and the pea powdery mildew Erysiphe pisi uncovers distinct host transcriptional signatures during incompatible and compatible interactions and pathogen effector candidates. Gupta M, et al. Genomics, 2020 May. PMID 31837401

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell division IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    anaphase-promoting complex subunit 7
    Names
    putative tetratricopeptide-like helical domain-containing protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Medicago truncatula Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference MtrunA17r5.0-ANR Primary Assembly

    Genomic

    1. NC_053043.1 Reference MtrunA17r5.0-ANR Primary Assembly

      Range
      6619386..6626844
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003593918.4 → XP_003593966.1  anaphase-promoting complex subunit 7 isoform X1

      See identical proteins and their annotated locations for XP_003593966.1

      UniProtKB/TrEMBL
      G7IPZ9
      Conserved Domains (2) summary
      sd00006
      Location:348 → 378
      TPR; TPR repeat [structural motif]
      cl26002
      Location:144 → 526
      TPR_11; TPR repeat

    2. XM_024776861.2 → XP_024632629.1  anaphase-promoting complex subunit 7 isoform X2

      Conserved Domains (2) summary
      sd00006
      Location:274 → 304
      TPR; TPR repeat [structural motif]
      cl26002
      Location:70 → 452
      TPR_11; TPR repeat

    RNA

    1. XR_005644069.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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