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    LOC11438100 peptidyl-prolyl cis-trans isomerase CYP26-2, chloroplastic [ Medicago truncatula (barrel medic) ]

    Gene ID: 11438100, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC11438100
    Gene description
    peptidyl-prolyl cis-trans isomerase CYP26-2, chloroplastic
    Locus tag
    MtrunA17_Chr4g0062381
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Medicago truncatula
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    102 current MtrunA17r5.0-ANR (GCF_003473485.1) 4 NC_053045.1 (54197109..54198608, complement)
    101 previous assembly MedtrA17_4.0 (GCF_000219495.3) 4 NC_016410.2 (46157262..46158723, complement)

    Chromosome 4 - NC_053045.1Genomic Context describing neighboring genes Neighboring gene replication protein A 70 kDa DNA-binding subunit C-like Neighboring gene uncharacterized LOC11440215 Neighboring gene phosphopantothenate--cysteine ligase 2 Neighboring gene single-stranded DNA-binding protein, mitochondrial

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables peptidyl-prolyl cis-trans isomerase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein peptidyl-prolyl isomerization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    peptidyl-prolyl cis-trans isomerase CYP26-2, chloroplastic
    Names
    putative peptidylprolyl isomerase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Medicago truncatula Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference MtrunA17r5.0-ANR Primary Assembly

    Genomic

    1. NC_053045.1 Reference MtrunA17r5.0-ANR Primary Assembly

      Range
      54197109..54198608 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003609031.4 → XP_003609079.1  peptidyl-prolyl cis-trans isomerase CYP26-2, chloroplastic

      See identical proteins and their annotated locations for XP_003609079.1

      UniProtKB/TrEMBL
      G7JRX9
      Conserved Domains (1) summary
      cl00197
      Location:112 → 317
      cyclophilin; cyclophilin: cyclophilin-type peptidylprolyl cis- trans isomerases. This family contains eukaryotic, bacterial and archeal proteins which exhibit a peptidylprolyl cis- trans isomerases activity (PPIase, Rotamase) and in addition bind the ...
    Nucleotide Protein
    Heading Accession and Version

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