U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC11429289 lipid droplet phospholipase 1 [ Medicago truncatula (barrel medic) ]

    Gene ID: 11429289, updated on 7-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC11429289
    Gene description
    lipid droplet phospholipase 1
    Locus tag
    MtrunA17_Chr1g0170451
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Medicago truncatula
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 1
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    102 current MtrunA17r5.0-ANR (GCF_003473485.1) 1 NC_053042.1 (19192802..19198566)
    101 previous assembly MedtrA17_4.0 (GCF_000219495.3) 1 NC_016407.2 (18632731..18638501)

    Chromosome 1 - NC_053042.1Genomic Context describing neighboring genes Neighboring gene sucrose-phosphatase 1 Neighboring gene glycerol-3-phosphate acyltransferase RAM2-like Neighboring gene ethylene-responsive transcription factor ERF107 Neighboring gene endonuclease 4-like

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Dual RNA-Seq analysis of Medicago truncatula and the pea powdery mildew Erysiphe pisi uncovers distinct host transcriptional signatures during incompatible and compatible interactions and pathogen effector candidates. Gupta M, et al. Genomics, 2020 May. PMID 31837401

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in cellular lipid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    lipid droplet phospholipase 1
    Names
    putative alpha/Beta hydrolase
    putative lipase YOR059C
    serine esterase family protein

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Medicago truncatula Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference MtrunA17r5.0-ANR Primary Assembly

    Genomic

    1. NC_053042.1 Reference MtrunA17r5.0-ANR Primary Assembly

      Range
      19192802..19198566
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003589805.3 → XP_003589853.1  lipid droplet phospholipase 1

      See identical proteins and their annotated locations for XP_003589853.1

      UniProtKB/TrEMBL
      G7IDH3
      Conserved Domains (1) summary
      pfam05057
      Location:29 → 252
      DUF676; Putative serine esterase (DUF676)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases