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    LOC114264742 ubiquitin-conjugating enzyme E2-17 kDa-like [ Camellia sinensis ]

    Gene ID: 114264742, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC114264742
    Gene description
    ubiquitin-conjugating enzyme E2-17 kDa-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Camellia sinensis
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia
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    Genomic context

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    See LOC114264742 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    100 current AHAU_CSS_1 (GCF_004153795.1) Unplaced Scaffold NW_021025787.1 (63429..69624, complement)

    NW_021025787.1Genomic Context describing neighboring genes Neighboring gene 18.2 kDa class I heat shock protein-like Neighboring gene UDP-glucose iridoid glucosyltransferase-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_021025787 Unplaced Scaffold Reference AHAU_CSS_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin conjugating enzyme activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein polyubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ubiquitin-conjugating enzyme E2-17 kDa-like
    Names
    ubiquitin-conjugating enzyme E2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Camellia sinensis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference AHAU_CSS_1 Primary Assembly

    Genomic

    1. NW_021025787.1 Reference AHAU_CSS_1 Primary Assembly

      Range
      63429..69624 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028205438.1 → XP_028061239.1  ubiquitin-conjugating enzyme E2-17 kDa-like

      UniProtKB/TrEMBL
      G3G859, G9HVM6
      Conserved Domains (1) summary
      cl00154
      Location:1 → 146
      UBCc; Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated protein degradation pathway in which a thiol-ester linkage forms between a conserved cysteine and the C-terminus of ubiquitin and complexes with ubiquitin ...
    Nucleotide Protein
    Heading Accession and Version

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