U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC11425332 uncharacterized LOC11425332 [ Medicago truncatula (barrel medic) ]

    Gene ID: 11425332, updated on 18-Aug-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC11425332
    Gene description
    uncharacterized LOC11425332
    Locus tag
    MtrunA17_Chr6g0452251
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Medicago truncatula
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC11425332 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    102 current MtrunA17r5.0-ANR (GCF_003473485.1) 6 NC_053047.1 (2707319..2711895)
    101 previous assembly MedtrA17_4.0 (GCF_000219495.3) 6 NC_016412.2 (2781672..2786244)

    Chromosome 6 - NC_053047.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC11421087 Neighboring gene putative rRNA methyltransferase YlbH Neighboring gene transcription factor MYB35 Neighboring gene probable prolyl 4-hydroxylase 7

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Dual RNA-Seq analysis of Medicago truncatula and the pea powdery mildew Erysiphe pisi uncovers distinct host transcriptional signatures during incompatible and compatible interactions and pathogen effector candidates. Gupta M, et al. Genomics, 2020 May. PMID 31837401

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein LOC11425332
    Names
    plant/F14N23-31 protein
    putative protein ENHANCED DISEASE RESISTANCE 2

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Medicago truncatula Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference MtrunA17r5.0-ANR Primary Assembly

    Genomic

    1. NC_053047.1 Reference MtrunA17r5.0-ANR Primary Assembly

      Range
      2707319..2711895
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_013595446.3 → XP_013450900.1  uncharacterized protein LOC11425332 isoform X2

      UniProtKB/TrEMBL
      A0A072UGN5, I3SS57
      Conserved Domains (1) summary
      pfam07059
      Location:113 → 353
      DUF1336; Protein of unknown function (DUF1336)

    2. XM_003618379.4 → XP_003618427.1  uncharacterized protein LOC11425332 isoform X1

      See identical proteins and their annotated locations for XP_003618427.1

      UniProtKB/TrEMBL
      G7KK06, I3SS57
      Conserved Domains (1) summary
      pfam07059
      Location:190 → 430
      DUF1336; Protein of unknown function (DUF1336)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases