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    LOC11419690 AAA-ATPase ASD, mitochondrial [ Medicago truncatula (barrel medic) ]

    Gene ID: 11419690, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC11419690
    Gene description
    AAA-ATPase ASD, mitochondrial
    Locus tag
    MtrunA17_Chr6g0452391
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Medicago truncatula
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
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    Genomic context

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    See LOC11419690 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    102 current MtrunA17r5.0-ANR (GCF_003473485.1) 6 NC_053047.1 (2766965..2768827)
    101 previous assembly MedtrA17_4.0 (GCF_000219495.3) 6 NC_016412.2 (2841325..2843404)

    Chromosome 6 - NC_053047.1Genomic Context describing neighboring genes Neighboring gene AAA-ATPase ASD, mitochondrial-like Neighboring gene AAA-ATPase ASD, mitochondrial Neighboring gene AAA-ATPase At3g28510 Neighboring gene AAA-ATPase At3g28510-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Dual RNA-Seq analysis of Medicago truncatula and the pea powdery mildew Erysiphe pisi uncovers distinct host transcriptional signatures during incompatible and compatible interactions and pathogen effector candidates. Gupta M, et al. Genomics, 2020 May. PMID 31837401

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    AAA-ATPase ASD, mitochondrial
    Names
    P-loop nucleoside triphosphate hydrolase superfamily protein
    putative ATPase, AAA-type, core, AAA-type ATPase domain-containing protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Medicago truncatula Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference MtrunA17r5.0-ANR Primary Assembly

    Genomic

    1. NC_053047.1 Reference MtrunA17r5.0-ANR Primary Assembly

      Range
      2766965..2768827
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003618391.4 → XP_003618439.2  AAA-ATPase ASD, mitochondrial

      UniProtKB/TrEMBL
      A0A0C3VTF9, G7KK18
      Conserved Domains (3) summary
      pfam00004
      Location:246 → 394
      AAA; ATPase family associated with various cellular activities (AAA)
      pfam14363
      Location:28 → 122
      AAA_assoc; Domain associated at C-terminal with AAA
      cl25701
      Location:215 → 274
      RuvB_N; Holliday junction DNA helicase ruvB N-terminus
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Other Literature Sources
    Molecular Biology Databases