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    LOC11414811 probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 [ Medicago truncatula (barrel medic) ]

    Gene ID: 11414811, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC11414811
    Gene description
    probable inactive leucine-rich repeat receptor-like protein kinase At3g03770
    Locus tag
    MtrunA17_Chr3g0116231
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Medicago truncatula
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
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    Genomic context

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    See LOC11414811 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    102 current MtrunA17r5.0-ANR (GCF_003473485.1) 3 NC_053044.1 (37488795..37504677, complement)
    101 previous assembly MedtrA17_4.0 (GCF_000219495.3) 3 NC_016409.2 (34001012..34017241, complement)

    Chromosome 3 - NC_053044.1Genomic Context describing neighboring genes Neighboring gene argininosuccinate synthase, chloroplastic Neighboring gene putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial Neighboring gene argininosuccinate synthase, chloroplastic Neighboring gene 4-coumarate--CoA ligase-like 9 Neighboring gene 4-coumarate--CoA ligase-like 9

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Dual RNA-Seq analysis of Medicago truncatula and the pea powdery mildew Erysiphe pisi uncovers distinct host transcriptional signatures during incompatible and compatible interactions and pathogen effector candidates. Gupta M, et al. Genomics, 2020 May. PMID 31837401
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable inactive leucine-rich repeat receptor-like protein kinase At3g03770
    Names
    LRR receptor-like kinase family protein
    putative protein kinase RLK-Pelle-LRR-VI-1 family

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Medicago truncatula Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference MtrunA17r5.0-ANR Primary Assembly

    Genomic

    1. NC_053044.1 Reference MtrunA17r5.0-ANR Primary Assembly

      Range
      37488795..37504677 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024779813.2 → XP_024635581.1  probable inactive leucine-rich repeat receptor-like protein kinase At3g03770

      UniProtKB/TrEMBL
      G7J520
      Conserved Domains (3) summary
      PLN00113
      Location:113 → 750
      PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
      sd00033
      Location:119 → 142
      LRR_RI; leucine-rich repeat [structural motif]
      cl21453
      Location:487 → 742
      PKc_like; Protein Kinases, catalytic domain

    2. XM_024779815.2 → XP_024635583.1  probable inactive leucine-rich repeat receptor-like protein kinase At3g03770

      UniProtKB/TrEMBL
      G7J520
      Conserved Domains (3) summary
      PLN00113
      Location:113 → 750
      PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
      sd00033
      Location:119 → 142
      LRR_RI; leucine-rich repeat [structural motif]
      cl21453
      Location:487 → 742
      PKc_like; Protein Kinases, catalytic domain

    3. XM_024779818.2 → XP_024635586.1  probable inactive leucine-rich repeat receptor-like protein kinase At3g03770

      UniProtKB/TrEMBL
      G7J520
      Conserved Domains (3) summary
      PLN00113
      Location:113 → 750
      PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
      sd00033
      Location:119 → 142
      LRR_RI; leucine-rich repeat [structural motif]
      cl21453
      Location:487 → 742
      PKc_like; Protein Kinases, catalytic domain

    4. XM_024779812.2 → XP_024635580.1  probable inactive leucine-rich repeat receptor-like protein kinase At3g03770

      UniProtKB/TrEMBL
      G7J520
      Conserved Domains (3) summary
      PLN00113
      Location:113 → 750
      PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
      sd00033
      Location:119 → 142
      LRR_RI; leucine-rich repeat [structural motif]
      cl21453
      Location:487 → 742
      PKc_like; Protein Kinases, catalytic domain

    5. XM_039831469.1 → XP_039687403.1  probable inactive leucine-rich repeat receptor-like protein kinase At3g03770

      UniProtKB/TrEMBL
      G7J520
      Conserved Domains (3) summary
      PLN00113
      Location:113 → 750
      PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
      sd00033
      Location:119 → 142
      LRR_RI; leucine-rich repeat [structural motif]
      cl21453
      Location:487 → 742
      PKc_like; Protein Kinases, catalytic domain

    6. XM_003602034.4 → XP_003602082.1  probable inactive leucine-rich repeat receptor-like protein kinase At3g03770

      See identical proteins and their annotated locations for XP_003602082.1

      UniProtKB/TrEMBL
      G7J520
      Conserved Domains (3) summary
      PLN00113
      Location:113 → 750
      PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
      sd00033
      Location:119 → 142
      LRR_RI; leucine-rich repeat [structural motif]
      cl21453
      Location:487 → 742
      PKc_like; Protein Kinases, catalytic domain
    Nucleotide Protein
    Heading Accession and Version

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