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    PLEKHA7 pleckstrin homology domain containing A7 [ Empidonax traillii (willow flycatcher) ]

    Gene ID: 114062467, updated on 3-Aug-2024

    Summary

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    Gene symbol
    PLEKHA7
    Gene description
    pleckstrin homology domain containing A7
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Empidonax traillii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Tyrannidae; Empidonax
    Orthologs
    human mouse all
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    Genomic context

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    See PLEKHA7 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    33
    Annotation release Status Assembly Chr Location
    100 current ASM303162v1 (GCF_003031625.1) Unplaced Scaffold NW_020955603.1 (217882..373449, complement)

    NW_020955603.1Genomic Context describing neighboring genes Neighboring gene transcription factor SOX-6-like Neighboring gene chromosome unknown C11orf58 homolog Neighboring gene uncharacterized LOC114062469 Neighboring gene phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha Neighboring gene ribosomal protein S13

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020955603 Unplaced Scaffold Reference ASM303162v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell-cell adhesion mediated by cadherin IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in epithelial cell-cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in pore complex assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in zonula adherens maintenance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of pore complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in zonula adherens IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    pleckstrin homology domain-containing family A member 7

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Empidonax traillii Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM303162v1

    Genomic

    1. NW_020955603.1 Reference ASM303162v1

      Range
      217882..373449 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_027893896.1 → XP_027749697.1  pleckstrin homology domain-containing family A member 7 isoform X2

    2. XM_027893898.1 → XP_027749699.1  pleckstrin homology domain-containing family A member 7 isoform X4

    3. XM_027893906.1 → XP_027749707.1  pleckstrin homology domain-containing family A member 7 isoform X11

    4. XM_027893895.1 → XP_027749696.1  pleckstrin homology domain-containing family A member 7 isoform X1

    5. XM_027893900.1 → XP_027749701.1  pleckstrin homology domain-containing family A member 7 isoform X6

    6. XM_027893899.1 → XP_027749700.1  pleckstrin homology domain-containing family A member 7 isoform X5

    7. XM_027893908.1 → XP_027749709.1  pleckstrin homology domain-containing family A member 7 isoform X13

    8. XM_027893902.1 → XP_027749703.1  pleckstrin homology domain-containing family A member 7 isoform X7

    9. XM_027893904.1 → XP_027749705.1  pleckstrin homology domain-containing family A member 7 isoform X9

    10. XM_027893905.1 → XP_027749706.1  pleckstrin homology domain-containing family A member 7 isoform X10

    11. XM_027893897.1 → XP_027749698.1  pleckstrin homology domain-containing family A member 7 isoform X3

    12. XM_027893907.1 → XP_027749708.1  pleckstrin homology domain-containing family A member 7 isoform X12

    13. XM_027893909.1 → XP_027749710.1  pleckstrin homology domain-containing family A member 7 isoform X14

    14. XM_027893903.1 → XP_027749704.1  pleckstrin homology domain-containing family A member 7 isoform X8

    Nucleotide Protein
    Heading Accession and Version

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