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    SELP selectin P [ Zalophus californianus (California sea lion) ]

    Gene ID: 113933162, updated on 15-Mar-2024

    Summary

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    Gene symbol
    SELP
    Gene description
    selectin P
    See related
    EnsemblRapid:ENSZCAG00025010417
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Zalophus californianus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Zalophus
    Orthologs
    human mouse all
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    Genomic context

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    See SELP in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    101 current mZalCal1.pri.v2 (GCF_009762305.2) 10 NC_045604.1 (56975627..57014149)
    100 previous assembly zalCal2.2 (GCF_900631625.1) Unplaced Scaffold NW_020874544.1 (52695388..52733919, complement)

    Chromosome 10 - NC_045604.1Genomic Context describing neighboring genes Neighboring gene selectin L Neighboring gene PHD finger protein 11-like Neighboring gene coagulation factor V Neighboring gene solute carrier family 19 member 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables oligosaccharide binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sialic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in leukocyte tethering or rolling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to cytokine IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in external side of plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    P-selectin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Zalophus californianus Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mZalCal1.pri.v2 Primary Assembly

    Genomic

    1. NC_045604.1 Reference mZalCal1.pri.v2 Primary Assembly

      Range
      56975627..57014149
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_027612993.2 → XP_027468794.1  P-selectin isoform X4

      UniProtKB/TrEMBL
      A0A6J2EIK3
      Related
      ENSZCAP00025016401.1, ENSZCAT00025018585.1

    2. XM_027613001.2 → XP_027468802.1  P-selectin isoform X11

      UniProtKB/TrEMBL
      A0A6J2EPI7
      Related
      ENSZCAP00025016448.1, ENSZCAT00025018636.1

    3. XM_027612991.2 → XP_027468792.1  P-selectin isoform X3

      UniProtKB/TrEMBL
      A0A6J2EPH6

    4. XM_027612997.2 → XP_027468798.1  P-selectin isoform X8

      UniProtKB/TrEMBL
      A0A6J2ET33

    5. XM_027612994.2 → XP_027468795.1  P-selectin isoform X5

      UniProtKB/TrEMBL
      A0A6J2EIK4

    6. XM_027613003.2 → XP_027468804.1  P-selectin isoform X13

      UniProtKB/TrEMBL
      A0A6J2EIL5

    7. XM_027612989.2 → XP_027468790.1  P-selectin isoform X1

      UniProtKB/TrEMBL
      A0A6J2EIJ8

    8. XM_027612996.2 → XP_027468797.1  P-selectin isoform X7

      UniProtKB/TrEMBL
      A0A6J2EPI1

    9. XM_027613002.2 → XP_027468803.1  P-selectin isoform X12

      UniProtKB/TrEMBL
      A0A6J2ET39

    10. XM_027612995.2 → XP_027468796.1  P-selectin isoform X6

      UniProtKB/TrEMBL
      A0A6J2EKG2

    11. XM_027612998.2 → XP_027468799.1  P-selectin isoform X9

      UniProtKB/TrEMBL
      A0A6J2EIK9

    12. XM_027612999.2 → XP_027468800.1  P-selectin isoform X10

      UniProtKB/TrEMBL
      A0A6J2EKG7

    13. XM_027612990.2 → XP_027468791.1  P-selectin isoform X2

      UniProtKB/TrEMBL
      A0A6J2EKF8
      Related
      ENSZCAP00025016499.1, ENSZCAT00025018695.1

    14. XM_027613000.2 → XP_027468801.1  P-selectin isoform X10

      UniProtKB/TrEMBL
      A0A6J2EKG7
    Nucleotide Protein
    Heading Accession and Version

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