U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC113539887 lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial [ Pangasianodon hypophthalmus (striped catfish) ]

    Gene ID: 113539887, updated on 23-Nov-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC113539887
    Gene description
    lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial
    Locus tag
    PHYPO_G00199160
    See related
    EnsemblRapid:ENSPHYG00025002032
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pangasianodon hypophthalmus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Pangasiidae; Pangasianodon
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC113539887 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2023_02 current fPanHyp1.pri (GCF_027358585.1) 4 NC_069713.1 (30800523..30809598)

    Chromosome 4 - NC_069713.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113539793 Neighboring gene cell division cycle 14Aa Neighboring gene xenotropic and polytropic retrovirus receptor 1b Neighboring gene discoidin domain receptor tyrosine kinase 2b

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_069713.1 Chromosome 4 Reference fPanHyp1.pri

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables acetyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables lipoic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_027358585.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fPanHyp1.pri

    Genomic

    1. NC_069713.1 Reference fPanHyp1.pri

      Range
      30800523..30809598
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_026935987.3 → XP_026791788.3  lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial

      Related
      ENSPHYP00025003700.1, ENSPHYT00025004398.1
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases